Gene
| Gene Model ID | pfu_aug2.0_242.1_07213 |
|---|---|
| Locus | scaffold242.1 : 102289 ... 110765 : - |
| To GenomeBrowser | scaffold242.1:102289..110765 |
| Genes list of scaffold | scaffold242.1 |
| Synonym | pfu_aug1.0_9502.1_60612 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_242.1_07213.t1 | 2 | 1 | Glyco_transf_49 | 34 | 283 | 0.0 | 269.9 | 2.60642e-43 | 1.3e-39 | 136.1 |
| pfu_aug2.0_242.1_07213.t1 | 2 | 1 | Glyco_tranf_2_2 | 66 | 171 | 6.7e-10 | 38.5 | 6.8e-08 | 0.00034 | 19.8 |
| pfu_aug2.0_242.1_07213.t1 | 2 | 2 | Glyco_transf_49 | 288 | 505 | 0.0 | 269.9 | 1.09301e-43 | 5.6e-40 | 137.3 |
| pfu_aug2.0_242.1_07213.t1 | 2 | 2 | Glyco_tranf_2_2 | 290 | 337 | 6.7e-10 | 38.5 | 5.3e-07 | 0.0026 | 16.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_242.1_07213.t1 | gi|675864626|ref|XP_009017873.1| | hypothetical protein HELRODRAFT_172968 [Helobdella robusta] | 2.0e-32 |
| pfu_aug2.0_242.1_07213.t1 | gi|242012431|ref|XP_002426936.1| | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase, putative [Pediculus humanus corporis] | 3.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_242.1_07213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07213.t1 atgacaacagcgagctgcgctgacagggaagaatattttataatcagggatgttttcaaaactttcaaaatgcgggaaat cttagccggaagtgacatcatcacaattattacacaaacgacgccaaatcatatcgaggctttggaccttctgttacagc gctggagcggtcctgtttccgtggcaatatttctatgcgtaaaagatattgcagccattctgaggtccctgtttagatat gggaatatgactgtttccttccatttcgtagcgatagattggaatcacgaaaattcgtctgtgtgtgaaatgatgatgac ctctaacactggatttatcaatccgcgggaaaaaagagtgcgctatccctacaacgttttgagaaatgtggcactgtcct ctgtaagaaacggatacgttttcatgactgacattgacttagttccctcagttaacctccatgatgattttctcagtcat gttgcatctatatcaaacgacaataaagttcctgataattctatttctcctgaagtttatatgttgaagttcagaactgc ttacgtcataccgtctttcgagtcattcaacaaatattattatgcggatgataaaaatgaaataatcgcttatgttcaaa aagggttggtaagacagtatgcatacgaatcatgtaaacattgtcagaacaacaccaattataagagatggttgtcaaac ccttcacatggagactacgaaataccgatgagtgtttaccgctacgagcctttcttcatcttgcaccacagtagttatcc aagtttcgatgaacggttcaaggacaggggccttaacagactcgcacagagagacgtgggggtttcatatccttataacg tgttgaggaatgtagctctttccgccgtgaaatcgggatatattttcatgatagatatcgacatgttgacctctgtgaat ctccatgataattttctgagtcatataggaactatatcaaataacacaaaaatgactagtaataattcattttctattac ccgggcagagtacatgatgaaatttaggacagcttatgtcattccatctttcgagtctcaaagtccttcttatgatgtca aacataagtacgagttgcttcccttagtaggagaaggattcgtcagaccatatgcttctgcatcgtgcaaacattgtcag aagaatacaaactataaaaaatggctctcagattcggaacacggtgcctacgatatacctatgagcccctaccattacga accattcttcatccttcacaaaagtagttatccaagttttaacgaattgttcaaggacaggggtcttaacagagtatcac aggtatgtgaaacgtacatgtctggtgtcaatttccgtgtattgaacagtgggtttttacttcatcgaggattccgaccg agaaggataaaagattatgagaagaaaaactatctgatctacaacaacatgaagaaaacattaaaactgaagtacgatac gagcagggaatgtgatgtgatcgcaaattattcccgtattcaaactacaaccaccaagcccgtacttgcaaagccaaatt aa |
|
Protein
| Protein ID | pfu_aug2.0_242.1_07213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07213.t1 MTTASCADREEYFIIRDVFKTFKMREILAGSDIITIITQTTPNHIEALDLLLQRWSGPVSVAIFLCVKDIAAILRSLFRY GNMTVSFHFVAIDWNHENSSVCEMMMTSNTGFINPREKRVRYPYNVLRNVALSSVRNGYVFMTDIDLVPSVNLHDDFLSH VASISNDNKVPDNSISPEVYMLKFRTAYVIPSFESFNKYYYADDKNEIIAYVQKGLVRQYAYESCKHCQNNTNYKRWLSN PSHGDYEIPMSVYRYEPFFILHHSSYPSFDERFKDRGLNRLAQRDVGVSYPYNVLRNVALSAVKSGYIFMIDIDMLTSVN LHDNFLSHIGTISNNTKMTSNNSFSITRAEYMMKFRTAYVIPSFESQSPSYDVKHKYELLPLVGEGFVRPYASASCKHCQ KNTNYKKWLSDSEHGAYDIPMSPYHYEPFFILHKSSYPSFNELFKDRGLNRVSQVCETYMSGVNFRVLNSGFLLHRGFRP RRIKDYEKKNYLIYNNMKKTLKLKYDTSRECDVIANYSRIQTTTTKPVLAKPN |
|