Gene
| Gene Model ID | pfu_aug2.0_242.1_07215 |
|---|---|
| Locus | scaffold242.1 : 148096 ... 156970 : + |
| To GenomeBrowser | scaffold242.1:148096..156970 |
| Genes list of scaffold | scaffold242.1 |
| Synonym | pfu_aug1.0_7361.1_60234 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_242.1_07215.t1 | 1 | 1 | 7TM_GPCR_Srsx | 44 | 319 | 5.5e-13 | 48.6 | 2.2e-16 | 8.0e-13 | 48.1 |
| pfu_aug2.0_242.1_07215.t1 | 1 | 1 | 7tm_1 | 50 | 306 | 7.90052e-42 | 143.1 | 2.8026e-45 | 1.19993e-41 | 142.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_242.1_07215.t1 | gi|403183318|gb|EAT34879.2| | 1.0e-20 | |
| pfu_aug2.0_242.1_07215.t1 | gi|260802806|ref|XP_002596283.1| | hypothetical protein BRAFLDRAFT_65960 [Branchiostoma floridae] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_242.1_07215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07215.t1 atgtctaacgagattccaaatgtcacagacgccaacttaaatacgagtacatcgaatctggaagagcccccatttgacga gccgtcccttttagtattaaatattttaactaccttcatcttcactgtcttcatcgttggaacaactgggaattcctttg tccttttcatctacatccgatccaaacagttacaagacgcagccacgaaattcatattgaatctggctgtcactgatctt tgtacagctatcttcattgcaatctatgagataatcctattgattgatgtgtccctgacagcaacatccaaaataacatg tctgatctgggagcagatactgactttctttatgtttgtctcacagtccgtcatcgccgtggcaacatttgacaggtaca tggctgtatgtcatcatgtactctacaggaaaataatgaccaaaatggtggtgataacattgctagccatggcatggata ctaccactctgctttgcagccatcccattctttggattcaacacctatgacgagtttccggaatgtttctacgagtacct gctaccagattggatgtatgtaaccctttcgtccatcatgattgttttgatgggcatcccattcgtcctttacatcctga tcttcaaaacagccatcgggttttaccgccgatttgaatctgcaaaagggaaagccggaagaaataatgctgatgatgaa agaaatcgagaaagaaagaaaacgataaaaaatggaaaaatcatgggaacagtaactctgatatttataatttgctggct gccatttcaaatttttcagtttttctttggttcaagtttcgatgcgaaatatcacacagctgtagcaaccacctaccaca ttgggatactgaattgcgtcgtcaacccatttatctacgcgtggcagaagaataaatttaaggaagaggcgaagaaattc ctcacatgcatttgtcgacctgaaatcgagcagaggcaggaaaagacgaagcctaatgatggtaaatctgtaaataagac agaggaaattcgcccactagataaatctgaaaatcaggaccagcaatcaaatgaaactgaaagcaagacccaaagcggca gcagtaattaa |
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Protein
| Protein ID | pfu_aug2.0_242.1_07215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07215.t1 MSNEIPNVTDANLNTSTSNLEEPPFDEPSLLVLNILTTFIFTVFIVGTTGNSFVLFIYIRSKQLQDAATKFILNLAVTDL CTAIFIAIYEIILLIDVSLTATSKITCLIWEQILTFFMFVSQSVIAVATFDRYMAVCHHVLYRKIMTKMVVITLLAMAWI LPLCFAAIPFFGFNTYDEFPECFYEYLLPDWMYVTLSSIMIVLMGIPFVLYILIFKTAIGFYRRFESAKGKAGRNNADDE RNRERKKTIKNGKIMGTVTLIFIICWLPFQIFQFFFGSSFDAKYHTAVATTYHIGILNCVVNPFIYAWQKNKFKEEAKKF LTCICRPEIEQRQEKTKPNDGKSVNKTEEIRPLDKSENQDQQSNETESKTQSGSSN |
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