Gene
| Gene Model ID | pfu_aug2.0_242.1_07216 |
|---|---|
| Locus | scaffold242.1 : 171136 ... 177613 : + |
| To GenomeBrowser | scaffold242.1:171136..177613 |
| Genes list of scaffold | scaffold242.1 |
| Synonym | pfu_aug1.0_46362.1_48621 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_242.1_07216.t1 | 2 | 1 | 7tm_1 | 55 | 211 | 3.0e-13 | 49.4 | 8.7e-11 | 3.2e-07 | 29.7 |
| pfu_aug2.0_242.1_07216.t1 | 2 | 2 | 7tm_1 | 237 | 356 | 3.0e-13 | 49.4 | 2.2e-09 | 8.0e-06 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_242.1_07216.t1 | gi|675857734|ref|XP_009014427.1| | hypothetical protein HELRODRAFT_191051 [Helobdella robusta] | 2.0e-09 |
| pfu_aug2.0_242.1_07216.t1 | gi|684411433|ref|XP_009176392.1| | hypothetical protein T265_15440 [Opisthorchis viverrini] | 4.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_242.1_07216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07216.t1 atgtctcacgttggctcaggtgttggcgtgaggttgtccaaggagcaggaggaaaccggagtacccggagataaacctcc tgcagaggcctggataggggaccatctaccctctcacaaaagacccttcgctgaatctgggattccatcccgggacctta gagcgctcacggacatggctgtattgatagttggactgccgcgctatttcctccaagaggtgactgaccctacactagac atccgagatgtttcagcttttagctgcaaattcagtcttttcctgatatattttaccatgcagctttcctcgtggctcct tgtgctcgtttcggtaatccgtttgatcaagaccgcgccatatcaattgttaaaacttcgcgtcagcatgactcgtgcga tgtttgcttttggtggaataactgttttcttggccttcctaaatcttcacttctttttcacaaatggtattattgatgat gaatgcaattctttaacgcctgaaatctatgagttcgaggaaaaaggattcgtttatgttgatctcatgttcctctctgt tcttccggcgcttatccttatcatctgtaatgtgtccatctacaaaactgtcaagagaatcggacatcgaagaacgtctg taacagcaatcagcaaatctacgcngaatcttcacttctttttcacaaatggtattattgatgatgaatgcaattcttta acgcctgaaatctatgagttcgaggaaaaaggattcgtttacgttgatctcatgttcctctctgtccttccggcgcttat ccttatcatctgtaatgtgtccatctacaaaactgtcaagagaatcggacatcgaagaacgtctgtaacagcaatcagca aatctacgcaacatagtgcctcgagggttacgcacatgctgctttttaccagcacatatttcattgcagccaatgtgcca atctcactatactttattgtggactcctatgtcaaagccggtgagcaccagactctactagacagtcagaagaacatgac ctggacagtgttctatctgtttcaattctcacatttcgcctcaaatttttatttctatacggctaccaataaaagttttc ggcgggagctgaaggcggtgcttcatagattcaagaaaataattgtacatggacggcacgtcgaccaatacgacacgagc aactgtcaagattcaaacaagaagggatatcctgactgcgtatggaataaaggaggcgatctcctacaagattcggtcgc agtacccacagcaaaacattcctatgcagagacactcagcagagaatcacaaaaaaaccccaagacgctaatgggacaag gaaaaccgaatacggcatctaataattga |
|
Protein
| Protein ID | pfu_aug2.0_242.1_07216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07216.t1 MSHVGSGVGVRLSKEQEETGVPGDKPPAEAWIGDHLPSHKRPFAESGIPSRDLRALTDMAVLIVGLPRYFLQEVTDPTLD IRDVSAFSCKFSLFLIYFTMQLSSWLLVLVSVIRLIKTAPYQLLKLRVSMTRAMFAFGGITVFLAFLNLHFFFTNGIIDD ECNSLTPEIYEFEEKGFVYVDLMFLSVLPALILIICNVSIYKTVKRIGHRRTSVTAISKSTXNLHFFFTNGIIDDECNSL TPEIYEFEEKGFVYVDLMFLSVLPALILIICNVSIYKTVKRIGHRRTSVTAISKSTQHSASRVTHMLLFTSTYFIAANVP ISLYFIVDSYVKAGEHQTLLDSQKNMTWTVFYLFQFSHFASNFYFYTATNKSFRRELKAVLHRFKKIIVHGRHVDQYDTS NCQDSNKKGYPDCVWNKGGDLLQDSVAVPTAKHSYAETLSRESQKNPKTLMGQGKPNTASNN |
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