Gene
| Gene Model ID | pfu_aug2.0_242.1_07217 |
|---|---|
| Locus | scaffold242.1 : 195900 ... 227148 : - |
| To GenomeBrowser | scaffold242.1:195900..227148 |
| Genes list of scaffold | scaffold242.1 |
| Synonym | pfu_aug1.0_17652.1_11054 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_242.1_07217.t1 | 1 | 1 | DUF4537 | 307 | 433 | 1.6e-06 | 27.8 | 1.3e-09 | 4.6e-06 | 26.4 |
| pfu_aug2.0_242.1_07217.t1 | 2 | 1 | HMG_box | 929 | 997 | 3.5e-34 | 116.8 | 3.1e-20 | 1.1e-16 | 60.7 |
| pfu_aug2.0_242.1_07217.t1 | 2 | 1 | HMG_box_2 | 930 | 989 | 1.6e-15 | 57.2 | 1.9e-10 | 6.9e-07 | 29.5 |
| pfu_aug2.0_242.1_07217.t1 | 2 | 2 | HMG_box | 1094 | 1162 | 3.5e-34 | 116.8 | 3.1e-20 | 1.1e-16 | 60.7 |
| pfu_aug2.0_242.1_07217.t1 | 2 | 2 | HMG_box_2 | 1095 | 1154 | 1.6e-15 | 57.2 | 1.9e-10 | 6.9e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_242.1_07217.t1 | gi|676459597|ref|XP_009055352.1| | hypothetical protein LOTGIDRAFT_153178 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_242.1_07217.t1 | gi|524916939|ref|XP_005113237.1| | PREDICTED: flocculation protein FLO11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_242.1_07217.t1 | gi|268053995|gb|ACY92484.1| | capicua-like transcription factor [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_242.1_07217.t1 | gi|291242109|ref|XP_002740950.1| | PREDICTED: protein capicua homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_242.1_07217.t1 | gi|528503336|ref|XP_005173570.1| | PREDICTED: protein capicua homolog isoform X3 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_242.1_07217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07217.t1 atgaggggaacaaaacggcgggctggtggggaaggtgactctgagctgagtccacgtcccgaaacaaagatggaggccac tgatggtaacccatcgtcacgacgaccgtccacacgcaatgctagagacgcaaaggacggaggcactgacatgaagaaga gggcggcatctaatagagggaaaaataccaaggggaataaatctgatgctacaaaggaccatgaagaagaaaatgggcag tctgggaataagttgacatatgataaccccacccatgttccctcaccaatagatcaatctgtcaagcccctagggatagg ccaagagcagatgtcttcactagagtctaaaaatactgagaggggcctgatacaggggcatagtgcattgaggggcccct tacagggcaatatgatgatgggaccccagcaaggaacaaataaccagagtgtacaagaagcaagttctagaagtgagttc ctggctccaacaggagatgtgaaaaaggacgttcagtcaacggaaatgtcaaaacgggaagactacacaagcagtctctt tacgaacaaaactcctacagcgagttctagaagtgagttcctggctccaacaggagaagtgaaaaaggacgttcagtcaa cggaaatgtcaaaacgggaagactacacaagcagtctctttacgaacaaaactcctagtacgataatgtccttacctggt gcaattcctttagttagacgagatactcaggaggagttacgcacagaaagcgtaatattgtcaccagggggcagcaccgg aggaatggaagaggaaagacgaattgctatacctccaaaaaaacgaaaaggaaatgatattgagagggaatcgttgtcac ctatcaaacgtcctgtaatcgatttgagtgaatggagaaatcagcgagttttggcgagaagagacggtatgtatcaaccg ggacaaatacaggatgtacggcaaaacagacacgtggcagtgctatttgacagtgataaaaatgtggtttattttaacga tgtcgttgatcagagatcaaattttgatattataagtgacaacagcccaatggccatgatggtgactaacgggtgtaaag tttgtgtcagagtcaactctgaagaaaatttatactacgagggacgagtagttgaaaaacgttcgcagccgacaatgtat tgtgtaaaaatagaaggatttcacgaacaacgtttcactgatcctcagtgggtccctcgagcagttctacgtcttataca gcctccgtggtttgaagatttagcggaaatccctgaaactccgacgcaagagcagatgcttcccgtaccaactttgggtt acactcatcattcattacagcacccgaccacgcccacttcccaccaaccacatttacaccctccacagatatcccccacc ctcaggcatagatttgagcgttcaccctcccttcctcagagtactggacacgacagaggcgactcttcagatgatgaaat aaaaagtgaggagttttactttgattcatcaggacttagtactccaagatcaggaagtgcaaccccagggtcagggtcaa ggtcacagggtgggagtggtggcagcagacccccgcccaagaaacgtgagctgtcaaggagtcgaagtgtgcagtcgtgc gaaagcagccgttcaagcacacccaggtctccaagcacgatacagaaatataaaaaaggggacgtagtgtcaactcctaa cggcatcaggaaaaaatttaacggcaagcaatggaggagactctgctctaaagagggatgtacgaaggaatcacaaagaa gagggtactgctctcggcatttgtcgatgagaggacagaaaaatatcagatcagggagtggaatgcagggtagaggggac atgaaagacggaggtcatatggaatgttctctccattctgctcagaggggaggcttactaagggaggcaacctctccgtc acgtggctcaggtctgcatagagagggggcctctgggagtgtctcctcattacaacatccaatacaggacattcagtcta ggcgggctactcagagtctctccatgagtgctttcccgtcccctggtccagaaagagggcggttgccaggcaacggacca tcagccctgccctcccagattcctcattcatcaatgacgacactgaagagcctgatcaatgctcgaccaatgacaacgca gacatcacttttgacccaaggtcagtcggcagcccatgtgaccggtcatgtgacgtcgttgataaagcagcagctacagc agcaagtcccaggatcctctctgactcccatgatgcctctgtctagtgaaggtagtaaaccttcacaagctgatcatcag attccacatattcagggaatgactgcagttgcctcacctgcaaacaaagccgtccctgtgtttccctggcatgccttggt tcctttcctgaaagcagatcaggctccgcccacttcagacaaaaagccaatagaaaagctggaagtgagtaagagtccat caccacggaaactaagccaaaacgaggctcatcatagtacatctgatgttccaccagtagatgatgacaatgatgattat gatgatgacgtttttgacagtaaagaggatgctgttcctgaggtgaaaaaagagcccaaagtgccggcaaaaagacgctc tcagtctctaagtgctctcaaagaagataataaaagccctaaaaagaacaaagacaaagatcatatcagacgacctatga atgcttttatgatcttcagcaaacgtcatcggcatttagttcaccagagacatcccaaccaagataatcgtacggttagc aagatactcggtgaatggtggtacgcactcggcccgaaggaaaaacagaaatacaacgacctggccaatcaggtcaaaga ggctcactttaaggcacatcctgaatggaaatggtgctccagagagaggaaaaaatcaggaacaatcgcggaaaaactca aacaacgtggctcgacctctagtcgtagactcagctccacagacgatatcctagatgatgcattagcagacacagttcct gaggacagtgataatgtattcatcaacagagaactagcgttatttgagccgagacgaggaggaagatctcaaagtttgtc ggcagtccctcgggatggtgaaggatcggcttttgttccgacatctttcggaattgatgaaaacaaagacaaagatcata tcagacgacctatgaatgcttttatgatcttcagcaaacgtcatcggcatctggtacaccagagacatcccaaccaagat aaccgtacggttagtaagatacttggtgaatggtggtacgcacttggcccaaaggaaaaacagaaatacaacgacctggc caatcaggtcaaagaggctcactttaaggcacatcctgagtggaaatggtgctccagggagaggaaaaaatcgggaacaa tagcggaaaaactcaaacaacggggctcgacttccagtcgtagactcagttccactgacgatatcctagacgatgcatta gcagacacagttcctgaggacagtgataatgtattcatcaacagagaactagcgttatttgagcccagacgaggaggaag atctcaaagtttgtcggcagtccctcgtgatggcgaaggatcggcttttgttccgacatctttcggaattgacgaagctt ttagaaggcagctatctaataattttggtcatcaatatcgaccttcacctttggcacagccacctagtaatgaaggtcaa ggtcagaggagattaggtcaaggctttaatataatgccagaacagattgaatcatctcatgggaacatgaaaatagttac caaggactctctcaccaaggagaccattaccaaggaaactggagatgaggaagctatcagtgatgatgagagaatggtga tagatgaagggggagataagagtgacggggacgacaaggacctgatgtgcgaggagcctggtttggatagcgacacagat tcacagacagaggaagacggactaatcgaaaacaaagcttttccgcaacaaagattctctcctgtcatgaaatctgtcag tccaggagacgtgacctttaggcctacaccaatcaaaaagcttcctgatcctaccggtaagggaggtaactcagttctgc ctggtgttaatgtagatattacagaacacattccgaggccatctagtgtgggatccagtttccaacctaagggagcagtg tttagagctaaatcaaagcaccctcgcttaatgtcaacaggaagtgcagtggagggtatgacctctgaccaagataaggt caacgttcccacggcaacatctgaaaaggtcaacacgagaatgccaaacactcagcaacagactcacaagtacgggcaga tgaagatacacaatatcaccatgacgacgcccgacaatcagaagatccttctgagtaccagcacggaaactgttcccgga aaacagaacgggaaaggtgcaattacaggaaaaatgacacaaaaatcgtttaaaaatagatctcagtcccagcagcctat acaacctgccttgacacctccgagtcagattccgcaggggatggcgggtcatattcagtcaataccggtgacctcgagta acgtgcagattttgtcggcaaatcaagtcctagtgacacaggttaacaatcaatcccattctttgactgccacttactcc actgtagggaagcccattacgacaccagtgcagattgcatcaaaagcggtcgtctctgtgcaacaagcaaccattggaat gccaacgatacttaaaccaggggttgtacccactcagcagtccctgggagttgggctacagcaaccgcttatacaaggtg cagtcaatactaataatgttaaagggatgggcactatcgtcctacaaccagcctcacagtataatatggcgatactgagt ccatcatctgtctcatctaatactaacgctacacaatcggcggtgcaaaataacatcggtaatggatttactacactacg aaacttggtacctccgggtgctcaaaattctctccccaacaccccgacacaaactgccgcccctgctacattactgacaa acttagtgctaaattcaaccaatcagacgcaagggtcccagtctctgcagggagctccgtcacaagtgcctaatgcccag cagccgacgctacaacccacacaaatacagtacattgtgccgtctgtacgtctggcgacacctaatggcggtaaaatgca aaatgtcctgcagatggcgctttcagggggacagggtcaaactaacgtgatacaaacacaggcgcagcaacagattgtac tcaatacagcaaagcaacaaactttaccattggctgttactcagtatcaaattatcaaccaatcagctggcctgattaca aatgctcaacaacatggtagcacaataccaacagtatctctgtctcagaatttagtgtcgcaacaggtccagttgccaac ggtaaccatagcccaacccattgtttccgtggcagcctttcaacaacaaccatctatgggtttaacacaacttcagcctc tcacccaggcagctcccaacaatccatccttcacacagcttcagaatgatgtaatttttgcacactgtaaaggtcaatac catcaaggacaagtccagctgacccccacccacacaaagacttaccagacaggtcaaatccttagcaaccacatactcac cggcaaccaggtcattgccaccggcaaccaactcgtgcagggcaaccaggtgttgcaacatggcaatcaggttgttcagc agcaacaaagtcttggtcagcaacctcagagaattcaattactaccaacgtctcaaaaaatgtatgtaactcagtccacg gtttccatggcaacagtagcatctccgtcccctgctacttctccggcatttattcagacttacgtaggatccatacaaca aggtccagctcagtccccaaagcctcaggttaccatggcaacagaatcaaagtcagagattggctacgtttctgggaatc ctcagtcgttaaggccacataaggttaaggcaaccatagcaaccatccccgtggcaaccgagagtttccaagcaacaata caacaacaagcccaaaagacttcacctgaaaccatgggaacaattgctatgacaacaatacgtacattacccagtcctca gcctactaccatctatcgccctactcctgtaggcggggcacaccgtccccataaaccctccccccttgttctgactccgc ctcataccacacaaaccatcccagaggtcagagttcaaagttcatcgggagaggaggtcagtgattctgaagtagtgaca gagaggtcaaataaaggtcagagatacaaggagatggctgcagaaatgggtctgtcacctgtaaggaaagatagaaagcc ctcacgtggcagctccagtgcagactccagcgacgacaaatctccgctaacacctcagaaatcaccagtagctcagagaa gtatggaggcttccatgcctgccccctccacaccaagctctgtgaatgcaccattacctagccccagacagagagcgaag cataagcccccacccttaccctcacctggtttagtcgcagcttctcctgggttacagtcccccagcagttctaccatcag tccaagaaaaaccgtgcagttcaagaaacggaatgaggatggaatggatagagtgctacagaacgtagattttgaacgaa gatttgaggaacttcccaaatttgtcccagaggaaatggacaagggttcccccctgccccaaagtcccagggctattatc tctgtatataaacaaaagaaacggaaggtgtcgagtcttgctgctagtgagatgacccccagagagttagagcagtatga gggaccgtctccagggtataaaaagatttcaagtgaatctgagactaacacaccccgaacccctcaccggtcggagggta ccacgcctaggaccccacacagtgctcgatttgacgacaatatgttctttggcaagaactttgatgtagagtcagcatta tctaaacaagaagcatttggagatagcagcagtagcatcccctgttctccgatgaccccaaagacgcccagctctccggg gcagttttcgtccctcagacgaattctcgatcaacgtagacaacttgtcatgcagctgtttgaggagcatggcctcttcc catcagcacaagccacggcatcctttcagagtgaacatgtggccgtgtttccgaccaaagtttgtctacagctgaaaata agagaagtacgtcagaaaatgatggcacagtcagcagctatcgaaaagtcggcagaggtcatactgccacctggtggaga gtccgggcagctgctaggggcagacaactctggagggtcagaaatgtttaatgtggagaatcaggattcagtaggaagtg ttgtcaatagcaacggttctgaggtgtcaagaggtgaagcatcagggacttga |
|
Protein
| Protein ID | pfu_aug2.0_242.1_07217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_242.1_07217.t1 MRGTKRRAGGEGDSELSPRPETKMEATDGNPSSRRPSTRNARDAKDGGTDMKKRAASNRGKNTKGNKSDATKDHEEENGQ SGNKLTYDNPTHVPSPIDQSVKPLGIGQEQMSSLESKNTERGLIQGHSALRGPLQGNMMMGPQQGTNNQSVQEASSRSEF LAPTGDVKKDVQSTEMSKREDYTSSLFTNKTPTASSRSEFLAPTGEVKKDVQSTEMSKREDYTSSLFTNKTPSTIMSLPG AIPLVRRDTQEELRTESVILSPGGSTGGMEEERRIAIPPKKRKGNDIERESLSPIKRPVIDLSEWRNQRVLARRDGMYQP GQIQDVRQNRHVAVLFDSDKNVVYFNDVVDQRSNFDIISDNSPMAMMVTNGCKVCVRVNSEENLYYEGRVVEKRSQPTMY CVKIEGFHEQRFTDPQWVPRAVLRLIQPPWFEDLAEIPETPTQEQMLPVPTLGYTHHSLQHPTTPTSHQPHLHPPQISPT LRHRFERSPSLPQSTGHDRGDSSDDEIKSEEFYFDSSGLSTPRSGSATPGSGSRSQGGSGGSRPPPKKRELSRSRSVQSC ESSRSSTPRSPSTIQKYKKGDVVSTPNGIRKKFNGKQWRRLCSKEGCTKESQRRGYCSRHLSMRGQKNIRSGSGMQGRGD MKDGGHMECSLHSAQRGGLLREATSPSRGSGLHREGASGSVSSLQHPIQDIQSRRATQSLSMSAFPSPGPERGRLPGNGP SALPSQIPHSSMTTLKSLINARPMTTQTSLLTQGQSAAHVTGHVTSLIKQQLQQQVPGSSLTPMMPLSSEGSKPSQADHQ IPHIQGMTAVASPANKAVPVFPWHALVPFLKADQAPPTSDKKPIEKLEVSKSPSPRKLSQNEAHHSTSDVPPVDDDNDDY DDDVFDSKEDAVPEVKKEPKVPAKRRSQSLSALKEDNKSPKKNKDKDHIRRPMNAFMIFSKRHRHLVHQRHPNQDNRTVS KILGEWWYALGPKEKQKYNDLANQVKEAHFKAHPEWKWCSRERKKSGTIAEKLKQRGSTSSRRLSSTDDILDDALADTVP EDSDNVFINRELALFEPRRGGRSQSLSAVPRDGEGSAFVPTSFGIDENKDKDHIRRPMNAFMIFSKRHRHLVHQRHPNQD NRTVSKILGEWWYALGPKEKQKYNDLANQVKEAHFKAHPEWKWCSRERKKSGTIAEKLKQRGSTSSRRLSSTDDILDDAL ADTVPEDSDNVFINRELALFEPRRGGRSQSLSAVPRDGEGSAFVPTSFGIDEAFRRQLSNNFGHQYRPSPLAQPPSNEGQ GQRRLGQGFNIMPEQIESSHGNMKIVTKDSLTKETITKETGDEEAISDDERMVIDEGGDKSDGDDKDLMCEEPGLDSDTD SQTEEDGLIENKAFPQQRFSPVMKSVSPGDVTFRPTPIKKLPDPTGKGGNSVLPGVNVDITEHIPRPSSVGSSFQPKGAV FRAKSKHPRLMSTGSAVEGMTSDQDKVNVPTATSEKVNTRMPNTQQQTHKYGQMKIHNITMTTPDNQKILLSTSTETVPG KQNGKGAITGKMTQKSFKNRSQSQQPIQPALTPPSQIPQGMAGHIQSIPVTSSNVQILSANQVLVTQVNNQSHSLTATYS TVGKPITTPVQIASKAVVSVQQATIGMPTILKPGVVPTQQSLGVGLQQPLIQGAVNTNNVKGMGTIVLQPASQYNMAILS PSSVSSNTNATQSAVQNNIGNGFTTLRNLVPPGAQNSLPNTPTQTAAPATLLTNLVLNSTNQTQGSQSLQGAPSQVPNAQ QPTLQPTQIQYIVPSVRLATPNGGKMQNVLQMALSGGQGQTNVIQTQAQQQIVLNTAKQQTLPLAVTQYQIINQSAGLIT NAQQHGSTIPTVSLSQNLVSQQVQLPTVTIAQPIVSVAAFQQQPSMGLTQLQPLTQAAPNNPSFTQLQNDVIFAHCKGQY HQGQVQLTPTHTKTYQTGQILSNHILTGNQVIATGNQLVQGNQVLQHGNQVVQQQQSLGQQPQRIQLLPTSQKMYVTQST VSMATVASPSPATSPAFIQTYVGSIQQGPAQSPKPQVTMATESKSEIGYVSGNPQSLRPHKVKATIATIPVATESFQATI QQQAQKTSPETMGTIAMTTIRTLPSPQPTTIYRPTPVGGAHRPHKPSPLVLTPPHTTQTIPEVRVQSSSGEEVSDSEVVT ERSNKGQRYKEMAAEMGLSPVRKDRKPSRGSSSADSSDDKSPLTPQKSPVAQRSMEASMPAPSTPSSVNAPLPSPRQRAK HKPPPLPSPGLVAASPGLQSPSSSTISPRKTVQFKKRNEDGMDRVLQNVDFERRFEELPKFVPEEMDKGSPLPQSPRAII SVYKQKKRKVSSLAASEMTPRELEQYEGPSPGYKKISSESETNTPRTPHRSEGTTPRTPHSARFDDNMFFGKNFDVESAL SKQEAFGDSSSSIPCSPMTPKTPSSPGQFSSLRRILDQRRQLVMQLFEEHGLFPSAQATASFQSEHVAVFPTKVCLQLKI REVRQKMMAQSAAIEKSAEVILPPGGESGQLLGADNSGGSEMFNVENQDSVGSVVNSNGSEVSRGEASGT |
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