Gene
| Gene Model ID | pfu_aug2.0_2420.1_02125 |
|---|---|
| Locus | scaffold2420.1 : 1188 ... 11655 : - |
| To GenomeBrowser | scaffold2420.1:1188..11655 |
| Genes list of scaffold | scaffold2420.1 |
| Synonym | pfu_aug1.0_12501.1_32214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2420.1_02125.t1 | 2 | 1 | Fibrinogen_C | 140 | 217 | 3.6e-37 | 128.2 | 3.2e-28 | 5.9e-25 | 88.2 |
| pfu_aug2.0_2420.1_02125.t1 | 2 | 2 | Fibrinogen_C | 224 | 274 | 3.6e-37 | 128.2 | 1.4e-14 | 2.6e-11 | 43.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2420.1_02125.t1 | gi|410929893|ref|XP_003978333.1| | PREDICTED: fibrinogen C domain-containing protein 1-like [Takifugu rubripes] | 1.0e-29 |
| pfu_aug2.0_2420.1_02125.t1 | gi|584058979|ref|XP_006773987.1| | PREDICTED: angiopoietin-2 isoform X1 [Myotis davidii] | 3.0e-29 |
| pfu_aug2.0_2420.1_02125.t1 | gi|554589119|ref|XP_005885910.1| | PREDICTED: angiopoietin-2 [Myotis brandtii] | 3.0e-29 |
| pfu_aug2.0_2420.1_02125.t1 | gi|617491166|ref|XP_007578349.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Poecilia formosa] | 4.0e-29 |
| pfu_aug2.0_2420.1_02125.t1 | gi|584058981|ref|XP_006773988.1| | PREDICTED: angiopoietin-2 isoform X2 [Myotis davidii] | 3.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_2420.1_02125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2420.1_02125.t1 atgagatgcgacaccggaacagatgatagtacagctgccaaatttgttcaaatgaacattcaagattcattaaactcatt acaaaaacagcttaattacgaaacatcaacacgtttgaagtttgacaaggatttaacagacatggccaggctatatagga ttatgaatggtgaacacacaaaactgaaacaggatgttaagtctctcatgaatgtgtccgtcaatactgatcaattgacg aacttagttaactacgtacgagagatgaaacaaaatacaaccactgacttcataaagcaagagaaatctgcgagagattt acaagacaatttggaaattttaagtagtcaagtccaattgttgaataagactatgttatcattgttaccaaacataaatc gtgcctcgacaggaaaaccagaagattgtaaagatattctaagttctgaacccaactcgagatccggcgtgtacaccatt tatcctgaaggaaaagtaggctattcagtatactgtgatatgacatcacaaggcgggggatggacagtaattcagaggag aataaacggggcattgcattttaataaaacttggaatgaatacaaagatggatttggggatcttcccggtgaacactgga taggtgatgactttgaacggaagggcggctacgatcacaacaatatgatgttctccacaaaggacagggataacgaccgt tctagtgtatcatgtgcaaggagatttgaaggaggctggtggtttaatagctgttacggtggatgtctgaattgtaaacg gttgtatgggaatagaggcgctatcaccttcaaatcatcatggatgatgatcaaatga |
|
Protein
| Protein ID | pfu_aug2.0_2420.1_02125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2420.1_02125.t1 MRCDTGTDDSTAAKFVQMNIQDSLNSLQKQLNYETSTRLKFDKDLTDMARLYRIMNGEHTKLKQDVKSLMNVSVNTDQLT NLVNYVREMKQNTTTDFIKQEKSARDLQDNLEILSSQVQLLNKTMLSLLPNINRASTGKPEDCKDILSSEPNSRSGVYTI YPEGKVGYSVYCDMTSQGGGWTVIQRRINGALHFNKTWNEYKDGFGDLPGEHWIGDDFERKGGYDHNNMMFSTKDRDNDR SSVSCARRFEGGWWFNSCYGGCLNCKRLYGNRGAITFKSSWMMIK |
|