Gene
| Gene Model ID | pfu_aug2.0_243.1_10493 |
|---|---|
| Locus | scaffold243.1 : 236632 ... 274809 : - |
| To GenomeBrowser | scaffold243.1:236632..274809 |
| Genes list of scaffold | scaffold243.1 |
| Synonym | pfu_aug1.0_9291.1_31743 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_243.1_10493.t1 | 2 | 1 | VWA_N | 47 | 127 | 7.8e-17 | 62.0 | 4.0e-16 | 2.0e-12 | 47.8 |
| pfu_aug2.0_243.1_10493.t1 | 2 | 1 | Cache_1 | 312 | 381 | 5.6e-16 | 57.8 | 4.6e-12 | 2.3e-08 | 33.4 |
| pfu_aug2.0_243.1_10493.t1 | 2 | 2 | VWA_N | 555 | 600 | 7.8e-17 | 62.0 | 7.4e-05 | 0.36 | 11.4 |
| pfu_aug2.0_243.1_10493.t1 | 2 | 2 | Cache_1 | 627 | 708 | 5.6e-16 | 57.8 | 2.5e-08 | 0.00013 | 21.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_243.1_10493.t1 | gi|390364270|ref|XP_798218.3| | 0.0 | |
| pfu_aug2.0_243.1_10493.t1 | gi|685515529|ref|XP_009208266.1| | PREDICTED: VWFA and cache domain-containing protein 1 [Papio anubis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_243.1_10493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10493.t1 atggcgtatgaagaaaaagctgtttctggtcacgcaacagcagttaagcttgcacagtctttgtccaccaagtttgaaag aatggaaaacgctctaaagaatattaatctcgccattgggagtaaatacgctgatttccaaacaacctcgtcaatgcaag aatgctgtagagaatcgggcctaaccttcaactctagatttaatgctatggtatctttggatcgagcttgtgtggctata tccggatcagcgggctctgataggaagattcccactcaggagattgttgaagcaatgaagtcaaacctgaacaatgaccc cactcttctgtggcagtattttggtagtgatcaaggtgttcttacaaactatccagcatccaatctgtcaaactgtcata cgcttgatgctcgattcaggaattactatgttgcaactgcatcccccgtgccaaaagatgtcgtcattatgtttgaggcg tcatcagcaatgacacagaaaagttttgagaacagtgacccttctactccagacaaacctttgatccaattggcaaagga gtcatccactactgtactcaacactctaggctccctggataggcgtaaatggcacggatacctcggtagagaatgagaca gaatcatcttgtttttgacaagtggatcatcatatagtgggaatccacttgaaatcatacgtgacggaaacgcagcgatg aataatgaagttgtcattcatgtattccaactaggaaaagacagaccacaggaaaccgaggaattgctcaggaacatctc gagacaagttttgagtcccggatcaacaagaactggtcgatatatggtcttgagcgaccagaaaatgctgatgacggcga tgggagaatactatcagtactccgagaatgaaagacaagaagaccctgtgttttctgaacccttcatcgacatgttttca caaaaagggttattgatttctatgtgtctacccgtttatactgttggcggtttcaaaggcgtggtttgtaatgattttcg actggaagaacttcttgctgacgtcacatatttgcgggaaggagagaacagttatgctttcgtcatagacggattcggac ggacacttgttcatccgttgcttcctcaaaggcgtcaatctacggataatcctgatattgtagatattgagaactttgag agactggttgggcaagatgttatacaatccatgaaacggggagaaacaggtaacaagaccgggatcgtcaccaagatgcc tataagtagaggtattatgctatacgaaggagatacgtccaaaacaatcaaagccaactatttctggaccaaggttcaga aaagtaattactccgtctgtgtagttattaaagaggacttgtcatcgttaaaagagctgaaagacgctaccattgacagc aaaggtttttattatcacacaagggaaataactgattacggaagtcagccatgtagacattacgcaagatgggcaactaa ggatcattcttgtgtgatgcttgctccgtcatcgtttgctgatccgacgggatatctaatcagaaacgaaactcaggcga aaatcagagagtatgaacgatatctgaggggagagagtacgaataatcctggatttgtggatacgttattgaattcagtt gcggcgacctacaaattagagtcattctggaaagattccattagtcatgatcaagctaaatatgtggtgtggaggtatat ttgcacaaaagatgggatcacccgactttacccatgtgtgcaactcaccaaagattatgacccggcattgcgtccatggt atcagagaacgatagcaaagcgcaaaaagtttgtattgtcaacaccttatttggatgcatggggatcgggctacctgctc actctgagcaggagtatgtacgaaggaaagtttaatggacaacactctccagatgatgtggttgtcggagtcatgggaac agatttaacagtaaactactttaaccaacttatccaggaaatatatccaatttgcggccaaactcaatcatacagttgta ttgtaatagatgacagtggttttatagtaatgcatccagactttgtggtaacaggatcagatcctggcttagataatctt ttccatattggaaataaggaaggtactatagcacgggaccttatttcacaaggtatcatgtatcgtgaaccatgccttga tacggaataccgcaaggaccaatttacctacaggataacgtacacactacagaattcagcgggtcttgatagaatggatg aagctgggtatgagatcagacctgtcccagacagcgtaatctctgtcattctgaaaaggaaatctacttcatcatctgct tgttgttcggattacaagaaatcaccgtcagtaaacaagtgtggttcagataattgcgactgtttgtgctatagggacgt agatttcaacgtgtgtaccaacaaatacgttcaaacagcccgtagtccaccctgcagtgcccgtccacagccacttctgt ctgttagtccgaacgaaacaacaaagacagacaaactgcaaaattgtttccaatttgactgtccacaaaaaatgtcgaaa aggagctgttttggtgtggcaggatgctcttggtgcgaggagacaatgaatgaaaacttttttgacaatccattctgcac tgacaagatacattgcccatttgggagatgtctaaaagaactccttatcttgaatggtcagaaaaccatcctctgcaagt atgacgtcatcatcggactgaaagtgggtgccagaaatagctgctttcatgcaggtctgatggagcaaaatcaggtgaat aaggcggatgctaaatcaaatttaagccacattcatgaatggaagccatggcggtga |
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Protein
| Protein ID | pfu_aug2.0_243.1_10493.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10493.t1 MAYEEKAVSGHATAVKLAQSLSTKFERMENALKNINLAIGSKYADFQTTSSMQECCRESGLTFNSRFNAMVSLDRACVAI SGSAGSDRKIPTQEIVEAMKSNLNNDPTLLWQYFGSDQGVLTNYPASNLSNCHTLDARFRNYYVATASPVPKDVVIMFEA SSAMTQKSFENSDPSTPDKPLIQLAKESSTTVLNTLGSLDRRKWHGYLGREXDRIILFLTSGSSYSGNPLEIIRDGNAAM NNEVVIHVFQLGKDRPQETEELLRNISRQVLSPGSTRTGRYMVLSDQKMLMTAMGEYYQYSENERQEDPVFSEPFIDMFS QKGLLISMCLPVYTVGGFKGVVCNDFRLEELLADVTYLREGENSYAFVIDGFGRTLVHPLLPQRRQSTDNPDIVDIENFE RLVGQDVIQSMKRGETGNKTGIVTKMPISRGIMLYEGDTSKTIKANYFWTKVQKSNYSVCVVIKEDLSSLKELKDATIDS KGFYYHTREITDYGSQPCRHYARWATKDHSCVMLAPSSFADPTGYLIRNETQAKIREYERYLRGESTNNPGFVDTLLNSV AATYKLESFWKDSISHDQAKYVVWRYICTKDGITRLYPCVQLTKDYDPALRPWYQRTIAKRKKFVLSTPYLDAWGSGYLL TLSRSMYEGKFNGQHSPDDVVVGVMGTDLTVNYFNQLIQEIYPICGQTQSYSCIVIDDSGFIVMHPDFVVTGSDPGLDNL FHIGNKEGTIARDLISQGIMYREPCLDTEYRKDQFTYRITYTLQNSAGLDRMDEAGYEIRPVPDSVISVILKRKSTSSSA CCSDYKKSPSVNKCGSDNCDCLCYRDVDFNVCTNKYVQTARSPPCSARPQPLLSVSPNETTKTDKLQNCFQFDCPQKMSK RSCFGVAGCSWCEETMNENFFDNPFCTDKIHCPFGRCLKELLILNGQKTILCKYDVIIGLKVGARNSCFHAGLMEQNQVN KADAKSNLSHIHEWKPWR |
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