Gene
| Gene Model ID | pfu_aug2.0_243.1_10494 |
|---|---|
| Locus | scaffold243.1 : 282184 ... 288699 : - |
| To GenomeBrowser | scaffold243.1:282184..288699 |
| Genes list of scaffold | scaffold243.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_243.1_10494.t1 | 5 | 1 | LRR_4 | 51 | 83 | 1.2e-08 | 34.4 | 0.0013 | 3.7 | 7.2 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 1 | LRR_6 | 70 | 78 | 2.0e-14 | 51.9 | 1.9 | 5700.0 | -2.0 |
| pfu_aug2.0_243.1_10494.t1 | 5 | 2 | LRR_4 | 102 | 140 | 1.2e-08 | 34.4 | 0.016 | 47.0 | 3.7 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 2 | LRR_6 | 103 | 113 | 2.0e-14 | 51.9 | 0.38 | 1100.0 | 0.2 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 3 | LRR_6 | 128 | 146 | 2.0e-14 | 51.9 | 0.00051 | 1.5 | 9.1 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 4 | LRR_6 | 171 | 192 | 2.0e-14 | 51.9 | 6.6e-06 | 0.02 | 14.9 |
| pfu_aug2.0_243.1_10494.t1 | 5 | 3 | LRR_4 | 172 | 214 | 1.2e-08 | 34.4 | 2.4e-05 | 0.072 | 12.7 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 5 | LRR_6 | 200 | 220 | 2.0e-14 | 51.9 | 0.15 | 440.0 | 1.5 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 6 | LRR_6 | 227 | 248 | 2.0e-14 | 51.9 | 3.5e-06 | 0.01 | 15.8 |
| pfu_aug2.0_243.1_10494.t1 | 5 | 4 | LRR_4 | 228 | 270 | 1.2e-08 | 34.4 | 1.0e-05 | 0.031 | 13.9 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 7 | LRR_6 | 255 | 274 | 2.0e-14 | 51.9 | 5.4e-05 | 0.16 | 12.1 |
| pfu_aug2.0_243.1_10494.t1 | 8 | 8 | LRR_6 | 283 | 298 | 2.0e-14 | 51.9 | 0.54 | 1600.0 | -0.3 |
| pfu_aug2.0_243.1_10494.t1 | 5 | 5 | LRR_4 | 287 | 299 | 1.2e-08 | 34.4 | 2.1 | 6100.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_243.1_10494.t1 | gi|524909018|ref|XP_005109595.1| | PREDICTED: protein NLRC3-like [Aplysia californica] | 4.0e-27 |
| pfu_aug2.0_243.1_10494.t1 | gi|260830627|ref|XP_002610262.1| | hypothetical protein BRAFLDRAFT_126829 [Branchiostoma floridae] | 9.0e-24 |
| pfu_aug2.0_243.1_10494.t1 | gi|156364310|ref|XP_001626292.1| | predicted protein [Nematostella vectensis] | 2.0e-23 |
| pfu_aug2.0_243.1_10494.t1 | gi|585676108|ref|XP_002736705.2| | PREDICTED: uncharacterized protein C1orf173-like [Saccoglossus kowalevskii] | 3.0e-23 |
| pfu_aug2.0_243.1_10494.t1 | gi|221127114|ref|XP_002164479.1| | PREDICTED: leucine-rich repeat-containing protein 73-like [Hydra vulgaris] | 7.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_243.1_10494.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10494.t1 atgtatggaggccatgatccggacaatgctgtggagggcgttggtgcaggaacatcatatctacggaaaataggtgtcaa accgggagtgactcatcaggggtctgtcagtaacctcctagaaggcaaagaagatgtagacttgaacggaatatctctga ataatgatcaggttgaggaagtaggtcagtatataagtaagcagagctgtctgaaaactctcagtatcaggaatggacag atgacaaacagccagtttgagacaattgccgattctctgatacagtcaaaggcaaaagtagcaatgctgaatttcagttt aaataagcttggggaatcttcagcagagaaaattgttgaactgatcaccgacataccaaccgtctctatcttaatgctac atgggaatcctataggagactctggagtgaaaactctcgttgatggactgcttgaccttcactatgctaacactggtgac aacgaagacgcaagaagcaatccagatttctgcaaacttacagaactcgatctcggagagacagggctaagtgatgacgg agcagatcaaatatccaggctaatagaatctaacatgtcactgaaaacactatatatgattgggaataagaaaattacgt cagctggatggaaaaagatcggcaaagccctgcgcagaaatacaacactcgaaaatttaagtctcgattttaccaacctt ggtgacgaaggattggcagcgttgattgttggtctccgtgacaaccaaactttaaaaactctagacctggagggaacggg tttgacagaggagggagggaaaaagttggtggaattgctgaaatgtaacactacgatacttgatatatcggtttcgcctg gaaataagatatcagagtatgtgagaggggaaatcagaaattatttaggacttaatagagcagctgctcaacctaagccc ttcaaataa |
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Protein
| Protein ID | pfu_aug2.0_243.1_10494.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10494.t1 MYGGHDPDNAVEGVGAGTSYLRKIGVKPGVTHQGSVSNLLEGKEDVDLNGISLNNDQVEEVGQYISKQSCLKTLSIRNGQ MTNSQFETIADSLIQSKAKVAMLNFSLNKLGESSAEKIVELITDIPTVSILMLHGNPIGDSGVKTLVDGLLDLHYANTGD NEDARSNPDFCKLTELDLGETGLSDDGADQISRLIESNMSLKTLYMIGNKKITSAGWKKIGKALRRNTTLENLSLDFTNL GDEGLAALIVGLRDNQTLKTLDLEGTGLTEEGGKKLVELLKCNTTILDISVSPGNKISEYVRGEIRNYLGLNRAAAQPKP FK |
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