Gene
| Gene Model ID | pfu_aug2.0_243.1_10496 |
|---|---|
| Locus | scaffold243.1 : 330530 ... 337473 : + |
| To GenomeBrowser | scaffold243.1:330530..337473 |
| Genes list of scaffold | scaffold243.1 |
| Synonym | pfu_aug1.0_1938.1_00904 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pyrroline-5-carboxylate reductase 3 | GO:0006561 GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_243.1_10496.t1 | 1 | 1 | F420_oxidored | 12 | 83 | 1.2e-09 | 38.4 | 1.7e-12 | 2.8e-09 | 37.2 |
| pfu_aug2.0_243.1_10496.t1 | 2 | 1 | P5CR_dimer | 78 | 91 | 9.2e-28 | 96.3 | 3.7 | 6100.0 | -2.8 |
| pfu_aug2.0_243.1_10496.t1 | 2 | 2 | P5CR_dimer | 215 | 317 | 9.2e-28 | 96.3 | 1.3e-30 | 2.2e-27 | 95.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_243.1_10496.t1 | gi|755990136|ref|XP_011312417.1| | PREDICTED: pyrroline-5-carboxylate reductase [Fopius arisanus] | 3.9937e-43 |
| pfu_aug2.0_243.1_10496.t1 | gi|91077326|ref|XP_974776.1| | PREDICTED: pyrroline-5-carboxylate reductase 3 [Tribolium castaneum] | 5.00264e-43 |
Transcript
| Transcript ID | pfu_aug2.0_243.1_10496.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10496.t1 atgccagaacaagaaatttcaactcgtacactgaaacctgaccaaattatttgcagtaaccgatctcagacaaatctaac aaaaataaaggagcttggagttgcgtctgtaaccacatcacatgatgaaatggtacttaagtgtgacgtcatcgtcatct gtatccatcctaaggcagtggttgacgtcctccgcagtttgtcccattgttgggaccagccgaaattggtggtatctgtg gcggctggcgttaccatagcatcaatggaagaggtattacctacaaattatcggattatacggatcctgcctaacttgcc gtcgatggtacgtgctggagcttccctattttccccgggaacacgagccactgacgatgacaaccgaattgtgaaggaac tgttctcagctgtaggtacttgtgacatggggaaggaagacgatatagacgtggcatcagttctggttgtcccattattt gtattacctacaaattatcggattatacggatcctgccgaacttgccgtcgatggtgcgtgccggagcttccctattttc cccgggaacacgagccactgacgatgacaaccgaattgtgaaggagctgttctcagctgtagggacttgtgacatgggga aggaagacgatatagacgtggcatcagtactagttgtcccattgtttggttacttagtgatagaatccatggcggatgga gctgtaaagatgggactaccacggaatctggcaacgaaaatggctgctcagtctttgttgggctcagcgaaacttctcct tgaaagtgggaaaacaccgggtcagctgaaagaggaggtgtgctcaccaggaggggttaccgtgacaacgctacattctc tagaacaagacggaattagagctaccatcatgaatgccatagaaaagggaacactccgggctaaacggatgggagacaaa taa |
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Protein
| Protein ID | pfu_aug2.0_243.1_10496.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10496.t1 MPEQEISTRTLKPDQIICSNRSQTNLTKIKELGVASVTTSHDEMVLKCDVIVICIHPKAVVDVLRSLSHCWDQPKLVVSV AAGVTIASMEEVLPTNYRIIRILPNLPSMVRAGASLFSPGTRATDDDNRIVKELFSAVGTCDMGKEDDIDVASVLVVPLF VLPTNYRIIRILPNLPSMVRAGASLFSPGTRATDDDNRIVKELFSAVGTCDMGKEDDIDVASVLVVPLFGYLVIESMADG AVKMGLPRNLATKMAAQSLLGSAKLLLESGKTPGQLKEEVCSPGGVTVTTLHSLEQDGIRATIMNAIEKGTLRAKRMGDK |
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