Gene
| Gene Model ID | pfu_aug2.0_243.1_10500 |
|---|---|
| Locus | scaffold243.1 : 387232 ... 396216 : - |
| To GenomeBrowser | scaffold243.1:387232..396216 |
| Genes list of scaffold | scaffold243.1 |
| Synonym | pfu_aug1.0_16306.1_61597 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_243.1_10500.t1 | 1 | 1 | BPL_LplA_LipB | 79 | 189 | 2.5e-16 | 59.8 | 2.9e-20 | 4.3e-16 | 59.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_243.1_10500.t1 | gi|676492961|ref|XP_009066091.1| | hypothetical protein LOTGIDRAFT_95116, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_243.1_10500.t1 | gi|524893417|ref|XP_005103224.1| | PREDICTED: lipoyltransferase 1, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_243.1_10500.t1 | gi|665816283|ref|XP_008556851.1| | PREDICTED: lipoyltransferase 1, mitochondrial [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_243.1_10500.t1 | gi|742166866|ref|XP_010884599.1| | PREDICTED: lipoyltransferase 1, mitochondrial [Esox lucius] | 0.0 |
| pfu_aug2.0_243.1_10500.t1 | gi|156553799|ref|XP_001601889.1| | PREDICTED: lipoyltransferase 1, mitochondrial-like [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_243.1_10500.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10500.t1 atgagatatcaaagactgcggattctacttggcaccgtattccggagaaacattcagattatcaatggaagaagactgag tagcgcagcttcagtttcaacattgcgtaaagtcttagtatctacatctgacgatatatttacaaaccttgcattggagg agtggatctacgaacatgaagatttgcgtaatcaatccatactactcatgtggcaaaataaaccagccgttgtgattggt cgacatcagaatccgtggttagagtgtgatgtcaatcagattctctgtaaagacgtacatcttgccagacgaaaaagtgg tggcggaacagtgtaccatgacctcggcaatttaaatctgtcatttttaatggataggtcgttatacgataggaagaaga atctggaattggtggtgaaggcagtaacacaaaaatgggacatagatttacatgtgaacgaaagggatgatatactgttg gagagtttttacaaggtctcgggaacagcttcaaaacttggacgagacaaaacttatcatcattttacacttctgcatga tgtcaacaaagaaaatgttttcaagtttctcgatagtaaacatgcaacagtaggagttcatagtcgtgcaactcagagtc ttcgagctcggataaagaatttatgtgaggctgatccagatatacaatttgatagtttagttcaggcgataggaaaatat tacattaaggaaaataattctaagggttccatccaatggataattccatctgaggaactttttccgggattactgaagct gaagcacgatctagaacaatgggagtgggtgtacggaaaaacaccaaagttttctctgatgaggaatttcacatttaacg actgtggagaacatctcgttttaaaactaaatattgaaattgataaaggacttataatggacattggaatagatgttagt ggattaagccaagaggaacaggtcattacggagtttatatccaaatttaaagaaattctcattggtaggagattatggac tgcagacattctagaattaatagataattttacacgcaattttaaaaagactgatacagatctaaatacgtattatccat ggtatgaaataataaaatggatttcaagttgtctaaagaagactttacatttatga |
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Protein
| Protein ID | pfu_aug2.0_243.1_10500.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_243.1_10500.t1 MRYQRLRILLGTVFRRNIQIINGRRLSSAASVSTLRKVLVSTSDDIFTNLALEEWIYEHEDLRNQSILLMWQNKPAVVIG RHQNPWLECDVNQILCKDVHLARRKSGGGTVYHDLGNLNLSFLMDRSLYDRKKNLELVVKAVTQKWDIDLHVNERDDILL ESFYKVSGTASKLGRDKTYHHFTLLHDVNKENVFKFLDSKHATVGVHSRATQSLRARIKNLCEADPDIQFDSLVQAIGKY YIKENNSKGSIQWIIPSEELFPGLLKLKHDLEQWEWVYGKTPKFSLMRNFTFNDCGEHLVLKLNIEIDKGLIMDIGIDVS GLSQEEQVITEFISKFKEILIGRRLWTADILELIDNFTRNFKKTDTDLNTYYPWYEIIKWISSCLKKTLHL |
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