Gene
| Gene Model ID | pfu_aug2.0_2438.1_28808 |
|---|---|
| Locus | scaffold2438.1 : 9056 ... 50421 : + |
| To GenomeBrowser | scaffold2438.1:9056..50421 |
| Genes list of scaffold | scaffold2438.1 |
| Synonym | pfu_aug1.0_10360.1_46191 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2438.1_28808.t1 | 2 | 1 | C1q | 3 | 35 | 1.6e-20 | 73.3 | 5.1 | 3200.0 | -2.0 |
| pfu_aug2.0_2438.1_28808.t1 | 4 | 1 | Sushi | 150 | 193 | 1.6e-24 | 85.9 | 6.0e-06 | 0.0037 | 17.5 |
| pfu_aug2.0_2438.1_28808.t1 | 4 | 2 | Sushi | 207 | 256 | 1.6e-24 | 85.9 | 1.7e-10 | 1.0e-07 | 32.1 |
| pfu_aug2.0_2438.1_28808.t1 | 4 | 3 | Sushi | 265 | 314 | 1.6e-24 | 85.9 | 1.9e-09 | 1.2e-06 | 28.7 |
| pfu_aug2.0_2438.1_28808.t1 | 4 | 4 | Sushi | 323 | 371 | 1.6e-24 | 85.9 | 1.9e-08 | 1.2e-05 | 25.5 |
| pfu_aug2.0_2438.1_28808.t1 | 2 | 2 | C1q | 396 | 517 | 1.6e-20 | 73.3 | 4.4e-23 | 2.7e-20 | 72.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2438.1_28808.t1 | gi|676425683|ref|XP_009044383.1| | hypothetical protein LOTGIDRAFT_156115 [Lottia gigantea] | 7.0e-31 |
| pfu_aug2.0_2438.1_28808.t1 | gi|533135859|ref|XP_005382795.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Chinchilla lanigera] | 2.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_2438.1_28808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2438.1_28808.t1 atgtcagtatctgaaagcgtctcaaaatctgaatatgatcaagaaataaggaaaatctacgagaaattggagaaacaaga tcagctacagtatcaattggaggaaataaggaaagaaaataaagttttgaaggaagatattcagattttacaacaagaga ataaggattttcaaataaccatcatgtcccttgaacacagatgtcacaaccttgaatctgatgtcgaaaaactgagaaag gagagacagaagataaaaacgaaaacaaaagtacaaagcgttttaaattcatattctgaaaggaaatctaaaactttcac atttcttggtattaccaattcaactcaccaaggaaatctaccagatgtcgtgtatcaaacggatacagattacacagtaa acataaaagaaagacgctcatctgataacgtaacgacttgcaacagttcaccaccaactataagctatggttatgagtcg cattcaaacagttctgtcacgtattactgcaatacaggatattctggatcaggaacaaatatctatagctgtcagattgg caaattgtggacgaacaactactggcccacaattaacttcacctgcacgattagaaattgtgggactccgtcaaccctca gtaacgggtaccgttcatactcaaatactacttacggatcaactgcgtattatcactgtaacactggttatagcggttct ggaatcaactccacatggtgtcagaacagtggaacttggagctcacttgggtacaaatgcaccattaaagattgtgggac tccgccaaccctcagtaacgcgtaccgttcgtacaacaatacaactgacggatcagctgcctcctatcaatgtaacattg gatataccggatctggaatcaactccacatcgtgtcagagcagtggaaattggagcactcttgggtacaaatgtactatt aaagactgcggtgctccccccagcctgccttatgggtatgcctcgtactctactactacttatggctcaacagctgcgta cttctgtaattctgattatattggagtcggaagcactcaggacatatcgtgtcaaagcagtggtaattggaccttccgat cgtatgcatgctataaagttcaccaaacaatacataaccacagcatcggattccttgcttacaacaaaatcgagcaacat aatctaggtatacaccagacagtagagtttcccactgcacttacaaatgaaggatctgcttacaatccctctagtagcat ctttcgagctcctgttgacggtctttattctttctctgtaactatacgaagtttccaaggagaggacctgagggcggaaa tagttcataatggtaacggtatcgtgtacacttactcaggtggtgaaagtatgtatggatccggatcaacatcagctgtc cttaagctacaggccaccgacgatgtttggattagaattctggattcaaaaagtacaagtaatggtaacatcagagtgta tggcaacaaatggtcgtcgttcagtggattcaaaatcgcataa |
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Protein
| Protein ID | pfu_aug2.0_2438.1_28808.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2438.1_28808.t1 MSVSESVSKSEYDQEIRKIYEKLEKQDQLQYQLEEIRKENKVLKEDIQILQQENKDFQITIMSLEHRCHNLESDVEKLRK ERQKIKTKTKVQSVLNSYSERKSKTFTFLGITNSTHQGNLPDVVYQTDTDYTVNIKERRSSDNVTTCNSSPPTISYGYES HSNSSVTYYCNTGYSGSGTNIYSCQIGKLWTNNYWPTINFTCTIRNCGTPSTLSNGYRSYSNTTYGSTAYYHCNTGYSGS GINSTWCQNSGTWSSLGYKCTIKDCGTPPTLSNAYRSYNNTTDGSAASYQCNIGYTGSGINSTSCQSSGNWSTLGYKCTI KDCGAPPSLPYGYASYSTTTYGSTAAYFCNSDYIGVGSTQDISCQSSGNWTFRSYACYKVHQTIHNHSIGFLAYNKIEQH NLGIHQTVEFPTALTNEGSAYNPSSSIFRAPVDGLYSFSVTIRSFQGEDLRAEIVHNGNGIVYTYSGGESMYGSGSTSAV LKLQATDDVWIRILDSKSTSNGNIRVYGNKWSSFSGFKIA |
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