Gene
| Gene Model ID | pfu_aug2.0_2438.1_28811 |
|---|---|
| Locus | scaffold2438.1 : 85095 ... 95875 : - |
| To GenomeBrowser | scaffold2438.1:85095..95875 |
| Genes list of scaffold | scaffold2438.1 |
| Synonym | pfu_aug1.0_24452.1_33435 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2438.1_28811.t1 | 3 | 1 | zf-B_box | 75 | 82 | 5.4e-07 | 29.4 | 0.44 | 6500.0 | -2.9 |
| pfu_aug2.0_2438.1_28811.t1 | 3 | 2 | zf-B_box | 121 | 166 | 5.4e-07 | 29.4 | 3.8e-08 | 0.00057 | 19.7 |
| pfu_aug2.0_2438.1_28811.t1 | 3 | 3 | zf-B_box | 183 | 215 | 5.4e-07 | 29.4 | 5.8e-09 | 8.7e-05 | 22.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2438.1_28811.t1 | gi|585653364|ref|XP_006815101.1| | PREDICTED: tripartite motif-containing protein 2-like [Saccoglossus kowalevskii] | 5.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_2438.1_28811.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2438.1_28811.t1 atggacagggtgaaagggaggcgggagaaagggggcgggaggaggttgaaagggagaagggagggaagagagaaaaatgg gagggaggggcgggtggagggagagaaggggtgggaggcgggaggtaagggaagggagggtgaaaaggagggggaaggag gtggcggcgggaggggggagcaattcatcaatagaaccgacaaagaggacaaaacagagacgatgtttctttgtccaata tgccgttgcgtaatcaatgtcccctgtgaaagtaaacatgattccagtgaaattgccagccgttttccgaccaatcattt gattgtaactttaatggattcaaactttctacacgactctaaaaacgtttgtggaccctgtcataagagatcgatagaag ccgaagccgtatcttggtgcattgaatgcaaatctttcctttgccagcaatgccttgaataccattccactttgccagtt ctagagacacatagcacaggacctctgaaagatgcccagtggttgaaagatggaatgtcttcttccttatactgcaaaac tcacccggagaaacgtttagagatgtattgtgaagatcatgagctcccatgttgtttgacatgtactatgattgatcata gacggtgtgaaaaagtcgatacactggaaaatgcatcaaaaagtgtaaaggcatccaaattaaaagacgaaatggaggtc aaacttgatggggaaatgaaaagggtaagggagaaactgagctctaagaaggcagacgaaaaacacctcttagaaaattg taaagaaattgaattatcaattgaaaatacaacagaacgtttgactgtgcatctgaaaaagttatcgacgaaggccttgc atgaattatcagaactccaagagaagcataggaatatcattctttctgacattgaatttatggaagaacgaaaacgtact atagaaaactatcaaacattacttcaggtgagcaagggcaaactatccaacgtacagttcttcctagaggctcaacgcct taaaggattatttgacagaggaattgaatttgggagtatgaaacaatccatagaaatgaagaaaacaccacggttcgaaa cagaaggcaatattctagatctcctgacggttgaagcatttgggaggatatgttttgccgaaatagtcgaggaattagaa gagaaaaagaaaagagaatttatagagggatccaataaacagacaaaagacacaaaaggggggacagatgattcaaaaat tcaagaaatcggtgggagttcattttgttcgaacaacaaagaggatgtagaagaagcaaacggaaacaagaaagacaaga aagatgtttgtggaaacgagccgcttgcacaaaacgaaacgtatattccttggcattgcgaactactgaaaaaggtcacc ttaaacacatcaaataacaattctgccgtgcacaactgcctgtttcttgatgatggacgtctagtgactgttgattacaa ggtgcgggactcaaaagacggaattataaagatctttgatcatgacttcgaaacctttaaaacggttcgtattcgaggca agccatgggctgccatagcattaaactctcaagtcttagctcttactattccttctcgtgacgagttgtgctttatggaa attgattcgttaagaaaaatataccaagattgtgacagaaaatatttcggtctagcccttaaggataaattgacaccagt ttataatcccttgggtaatcttaacgatgaaaagtgtacatttttcgtgacgtcaaagggaaatgtgtacttgagaacag ttactggtgtgatcttgatgcaagtgtctttgtccaaacgatatgtgcgcaatatctactacatacaggaccgtgtgtat ttcatggatgaccaagcacttgggtgttttcagctacacaggggattcctttttcaataccgagatgacgataaaagaag catgtcaggactagcattttacaaaccaaatgatgaagtagtcatctgtggagaagataacggcgatatttctgtcataa aattagacaaggatggaaataaaaaagcagaagaagaactagattgcgatgactcgtgcagttgggattctgattctaat gatggctctgattcttcagatggagatggattatcggaaccaaccggtttggcttttagctcaacatatgacaaactttg cattgtggacgggggtgatgtcgcgttcgtttactcaatcaaagcgggctcctattga |
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Protein
| Protein ID | pfu_aug2.0_2438.1_28811.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2438.1_28811.t1 MDRVKGRREKGGGRRLKGRREGREKNGREGRVEGEKGWEAGGKGREGEKEGEGGGGGRGEQFINRTDKEDKTETMFLCPI CRCVINVPCESKHDSSEIASRFPTNHLIVTLMDSNFLHDSKNVCGPCHKRSIEAEAVSWCIECKSFLCQQCLEYHSTLPV LETHSTGPLKDAQWLKDGMSSSLYCKTHPEKRLEMYCEDHELPCCLTCTMIDHRRCEKVDTLENASKSVKASKLKDEMEV KLDGEMKRVREKLSSKKADEKHLLENCKEIELSIENTTERLTVHLKKLSTKALHELSELQEKHRNIILSDIEFMEERKRT IENYQTLLQVSKGKLSNVQFFLEAQRLKGLFDRGIEFGSMKQSIEMKKTPRFETEGNILDLLTVEAFGRICFAEIVEELE EKKKREFIEGSNKQTKDTKGGTDDSKIQEIGGSSFCSNNKEDVEEANGNKKDKKDVCGNEPLAQNETYIPWHCELLKKVT LNTSNNNSAVHNCLFLDDGRLVTVDYKVRDSKDGIIKIFDHDFETFKTVRIRGKPWAAIALNSQVLALTIPSRDELCFME IDSLRKIYQDCDRKYFGLALKDKLTPVYNPLGNLNDEKCTFFVTSKGNVYLRTVTGVILMQVSLSKRYVRNIYYIQDRVY FMDDQALGCFQLHRGFLFQYRDDDKRSMSGLAFYKPNDEVVICGEDNGDISVIKLDKDGNKKAEEELDCDDSCSWDSDSN DGSDSSDGDGLSEPTGLAFSSTYDKLCIVDGGDVAFVYSIKAGSY |
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