Gene
| Gene Model ID | pfu_aug2.0_244.1_13858 |
|---|---|
| Locus | scaffold244.1 : 92588 ... 99635 : - |
| To GenomeBrowser | scaffold244.1:92588..99635 |
| Genes list of scaffold | scaffold244.1 |
| Synonym | pfu_aug1.0_7070.1_45579 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mannose-1-phosphate guanyltransferase beta | GO:0000166 GO:0005737 GO:0006488 GO:0009298 GO:0016779 GO:0018279 GO:0043687 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_244.1_13858.t1 | 2 | 1 | NTP_transferase | 2 | 140 | 5.1e-32 | 111.1 | 6.5e-33 | 1.9e-29 | 102.6 |
| pfu_aug2.0_244.1_13858.t1 | 1 | 1 | NTP_transf_3 | 3 | 113 | 9.8e-11 | 41.9 | 4.5e-14 | 1.3e-10 | 41.5 |
| pfu_aug2.0_244.1_13858.t1 | 2 | 2 | NTP_transferase | 143 | 175 | 5.1e-32 | 111.1 | 0.00086 | 2.6 | 7.3 |
| pfu_aug2.0_244.1_13858.t1 | 5 | 1 | Hexapep | 200 | 228 | 2.0e-15 | 55.4 | 1.8e-11 | 5.4e-08 | 31.9 |
| pfu_aug2.0_244.1_13858.t1 | 5 | 2 | Hexapep | 207 | 240 | 2.0e-15 | 55.4 | 7.3e-12 | 2.2e-08 | 33.2 |
| pfu_aug2.0_244.1_13858.t1 | 5 | 3 | Hexapep | 220 | 248 | 2.0e-15 | 55.4 | 2.4e-05 | 0.071 | 12.6 |
| pfu_aug2.0_244.1_13858.t1 | 5 | 4 | Hexapep | 238 | 266 | 2.0e-15 | 55.4 | 0.0034 | 10.0 | 5.8 |
| pfu_aug2.0_244.1_13858.t1 | 5 | 5 | Hexapep | 271 | 281 | 2.0e-15 | 55.4 | 0.2 | 600.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_244.1_13858.t1 | gi|524900500|ref|XP_005106670.1| | PREDICTED: mannose-1-phosphate guanyltransferase beta-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_244.1_13858.t1 | gi|676469579|ref|XP_009058578.1| | hypothetical protein LOTGIDRAFT_227532 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_244.1_13858.t1 | gi|632946711|ref|XP_007888693.1| | PREDICTED: mannose-1-phosphate guanyltransferase beta [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_244.1_13858.t1 | gi|557020127|ref|XP_006010396.1| | PREDICTED: mannose-1-phosphate guanyltransferase beta [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_244.1_13858.t1 | gi|511881592|ref|XP_004760688.1| | PREDICTED: mannose-1-phosphate guanyltransferase beta [Mustela putorius furo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_244.1_13858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13858.t1 atgaaggccttgattctagtgggaggatatggaacaaggttacgtcccctgactctcagctgtgcaaaacctctggtgga gtttggtaataaacccatgttactacatcagctggaagcattagtagaggcaggtgcaaagaccattgtattagctgtta gttatagagctgagcaaatggaacaagagatgagaaaagtggaggaaaaactgggtgtcaaaatcattatatctctagaa agtgagccattgggaacagctggacccttagctttggccagtgaacacttaacccaggattcagagccattctttgtact taatagtgatatcatctgtgattttccattcaaacaaatggttcagttccataaacaccatggaaaggaagggacgattg ttttaaagccaaccagtatagagaaggaggtgtttccatttatggcccaggatggagatttatatgctatggaattacaa ggtttctggatggacgttggtcagcctaaagatttcctcacaggaatgtgtttatatcttacttcactacgagaaaagtc cccagatatgctacatagtggtgaaggaattgtaggaaatgtccttgttgacccaagtgctaaaataggccacaattgta gaataggtcctaatgtaacaataggaccagatgtagtgatagaagacggggcatgtataaaacgatgtacgatattaaag ggggctagaatcaggtctcattcctggttagagtcctgtatcataggctggaaatgccacgtcggtcgatgggtacggat ggaaaatgtgtcagtactaggagaagacgtaacggtcaaggatgaattatatatcaacggaggtagaatcttaccacata agtctataggggactctataccggaacctcagattgttatgtag |
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Protein
| Protein ID | pfu_aug2.0_244.1_13858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13858.t1 MKALILVGGYGTRLRPLTLSCAKPLVEFGNKPMLLHQLEALVEAGAKTIVLAVSYRAEQMEQEMRKVEEKLGVKIIISLE SEPLGTAGPLALASEHLTQDSEPFFVLNSDIICDFPFKQMVQFHKHHGKEGTIVLKPTSIEKEVFPFMAQDGDLYAMELQ GFWMDVGQPKDFLTGMCLYLTSLREKSPDMLHSGEGIVGNVLVDPSAKIGHNCRIGPNVTIGPDVVIEDGACIKRCTILK GARIRSHSWLESCIIGWKCHVGRWVRMENVSVLGEDVTVKDELYINGGRILPHKSIGDSIPEPQIVM |
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