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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_244.1_13859
Locus scaffold244.1 : 110204 ... 128615 : -
To GenomeBrowser scaffold244.1:110204..128615
Genes list of scaffold scaffold244.1
Synonym pfu_aug1.0_7070.1_45578

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_244.1_13859.t1 gi|115923337|ref|XP_792877.2| PREDICTED: RNA pseudouridylate synthase domain-containing protein 3 [Strongylocentrotus purpuratus] 4.0e-10
pfu_aug2.0_244.1_13859.t1 gi|242006986|ref|XP_002424323.1| protein disulfide isomerase, putative [Pediculus humanus corporis] 1.0e-09
pfu_aug2.0_244.1_13859.t1 gi|746866292|ref|XP_011064205.1| PREDICTED: RNA pseudouridylate synthase domain-containing protein 4-like [Acromyrmex echinatior] 2.0e-08
pfu_aug2.0_244.1_13859.t1 gi|752889815|ref|XP_011262875.1| PREDICTED: RNA pseudouridylate synthase domain-containing protein 4-like isoform X2 [Camponotus floridanus] 4.0e-08
pfu_aug2.0_244.1_13859.t1 gi|752889813|ref|XP_011262874.1| PREDICTED: RNA pseudouridylate synthase domain-containing protein 4-like isoform X1 [Camponotus floridanus] 5.0e-08

Transcript
Transcript IDpfu_aug2.0_244.1_13859.t1
Definition-
>pfu_aug2.0_244.1_13859.t1
atgttcggtccaaagaaatcactgaagtccaccgtctcttttatttgctgcttgtgtaggagaaaatgtcatgttgatgc
tcaaacgaaaccttcattcatggagctggtgaaaaagcattgtaaaatgttaaacgacagagaggctatgtttaactacc
taacatctaatgtgatatttcagaatgagagaataattgctatcaataaacctatggaattaccactttcttaccaccct
ccaaagtcttaccaaggggcacctattccacttcatgaacaaccagttaatctagaagccttgttgccaagattacggga
acactttagagcgagcgatctgaatgtgtcagtgcctttacagaggctttatagtggtgtaatgattcttggcaggacta
ggaaagattgtgattggtttaagaagaagtcagagggactcaggaaacatagatttatgttccagcaaatgaatttgata
tgtataggtacaccacagtatttaccttcaaagccagaggatgtgttcttgaagtatgaaaagattaatgatgtccctca
gagtgtgatggtatcatcaccaagccataaccaaagatggtacagaaaggaggtagatatgatctgttgctaccctgagg
tggtgtcacagcacagtgaagagaaatctgatatgaaagcctggtgtcatgtcaaactgtttgtcacctcctctgcatta
gatgtatgtcagaattatatggcaagaaaaatgtcaccggtcctaggagatcagatttaccataaaaacgttaactttgt
ggtgggaaggaccgtgcctggtaacccaagacttaatccttataaagaaatgcctatagatcaaactctacttaatagac
tcaagataaccaaggatgagatcaacttaatacccctgatggtccacaaatcttccattaatgtgcatacgtaccttcag
gacccaatagaagcacctctaccagattattttaagctggcattagaaaaactttcactatcacaaactgataataagga
tagagatgttttaagtctttcctccaagagatattga

Protein
Protein IDpfu_aug2.0_244.1_13859.t1
Definition-
>pfu_aug2.0_244.1_13859.t1
MFGPKKSLKSTVSFICCLCRRKCHVDAQTKPSFMELVKKHCKMLNDREAMFNYLTSNVIFQNERIIAINKPMELPLSYHP
PKSYQGAPIPLHEQPVNLEALLPRLREHFRASDLNVSVPLQRLYSGVMILGRTRKDCDWFKKKSEGLRKHRFMFQQMNLI
CIGTPQYLPSKPEDVFLKYEKINDVPQSVMVSSPSHNQRWYRKEVDMICCYPEVVSQHSEEKSDMKAWCHVKLFVTSSAL
DVCQNYMARKMSPVLGDQIYHKNVNFVVGRTVPGNPRLNPYKEMPIDQTLLNRLKITKDEINLIPLMVHKSSINVHTYLQ
DPIEAPLPDYFKLALEKLSLSQTDNKDRDVLSLSSKRY

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