Gene
| Gene Model ID | pfu_aug2.0_244.1_13860 |
|---|---|
| Locus | scaffold244.1 : 131783 ... 138969 : + |
| To GenomeBrowser | scaffold244.1:131783..138969 |
| Genes list of scaffold | scaffold244.1 |
| Synonym | pfu_aug1.0_7070.1_45576 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_244.1_13860.t1 | 2 | 1 | Laps | 1 | 47 | 7.2e-25 | 87.6 | 3.4e-15 | 1.7e-11 | 44.4 |
| pfu_aug2.0_244.1_13860.t1 | 2 | 2 | Laps | 109 | 160 | 7.2e-25 | 87.6 | 1.0e-16 | 5.0e-13 | 49.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_244.1_13860.t1 | gi|410918568|ref|XP_003972757.1| | PREDICTED: protein LLP homolog [Takifugu rubripes] | 2.0e-07 |
| pfu_aug2.0_244.1_13860.t1 | gi|383853844|ref|XP_003702432.1| | PREDICTED: protein LLP homolog [Megachile rotundata] | 8.0e-06 |
| pfu_aug2.0_244.1_13860.t1 | gi|657756580|ref|XP_008313815.1| | PREDICTED: protein LLP homolog isoform X3 [Cynoglossus semilaevis] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_244.1_13860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13860.t1 atggatattgatgggaaaggcagaaaccccaaaacattacgtgatgaaaatgggcattatcctgtgtggatgaactcaag gagagtacgaaaacataaaaactcactgaaaaagaaatccaaaaagaagggcaaaaagagaggaaaagaacggaccggat cgggaatcgaaccagtaaccctctgctatcatggcagatgctcttacatactgagctatctgtgcacgataccagttcct gccacactcctctccaccaattttacaggtttccatgccctggaaacctcacatgagactccataccacaagtcaaaacc gactacaacatgtacaagctcagagggtatggatattgatgggaaaggcagaaaccccaaaacattacgtgatgaaaatg gacattatcctgtgtggatgaactcaagaagagtacgaaaacataaaaactcactgaaaaagaaatccaaaaagaagggc aaaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_244.1_13860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13860.t1 MDIDGKGRNPKTLRDENGHYPVWMNSRRVRKHKNSLKKKSKKKGKKRGKERTGSGIEPVTLCYHGRCSYILSYLCTIPVP ATLLSTNFTGFHALETSHETPYHKSKPTTTCTSSEGMDIDGKGRNPKTLRDENGHYPVWMNSRRVRKHKNSLKKKSKKKG KK |
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