Gene
| Gene Model ID | pfu_aug2.0_244.1_13862 |
|---|---|
| Locus | scaffold244.1 : 156233 ... 170031 : + |
| To GenomeBrowser | scaffold244.1:156233..170031 |
| Genes list of scaffold | scaffold244.1 |
| Synonym | pfu_aug1.0_3113.1_23185 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trna wybutosine-synthesizing protein 5 | GO:0000049 GO:0005506 GO:0016706 GO:0031591 GO:0042803 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_244.1_13862.t1 | 1 | 1 | Cupin_8 | 3 | 232 | 4.1058e-43 | 147.6 | 0.0 | 5.70328e-43 | 147.2 |
| pfu_aug2.0_244.1_13862.t1 | 1 | 1 | Cupin_4 | 94 | 222 | 4.2e-08 | 32.7 | 2.6e-11 | 9.5e-08 | 31.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_244.1_13862.t1 | gi|597059706|gb|AHN05306.1| | 0.0 | |
| pfu_aug2.0_244.1_13862.t1 | gi|564249234|ref|XP_006263697.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_244.1_13862.t1 | gi|557294790|ref|XP_006029824.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_244.1_13862.t1 | gi|612020323|ref|XP_007494639.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 isoform X2 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_244.1_13862.t1 | gi|530647582|ref|XP_005310390.1| | PREDICTED: tRNA wybutosine-synthesizing protein 5 isoform X2 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_244.1_13862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13862.t1 atgtcaagcagaattccaacagtgcttcaaggattagacattggttcttgtgttcagaagtggagttctctggaatatct gatgaaaaatggaggaaacaagcaagtcaaaatccatgtgtcagaatcacctcagatggattttatcaacaaaaactttg tttacaggtcacttccatttgatgatttcgtgagaagagcatctgaaaagacccactcagaatacttcatatcagaaaca gaaaattactaccttcgagcccttggagatgacccccggagagagatagctgacatacactcccagttccccacccttgc acaagatgtcaaatttcctgaccttttccccagggagaaatttttctccagcgtatttaggatagcatcagagggacttc agctctggacacattatgatattatggacaatttcctgatgcaaataagtgggaggaagaaggttgtattatttagtcct gatgatgtgaactacttgtatcttaatggtgataaatcagaggtccttgatgtggacaatccagacactgataaatttcc tgatttctacaaagctcagaaacatgtgtgcttcttagagccaggggacgttttatttataccagccttatggttccata atgtgatatccctcgactttggagtggcagttaatgtattctggaagcaccttgattcacagttctatgacagcaaggac acgtatggaaacaaagacctactaccagcaactcgtgccacacagatcattgagagggccgtcaaaactctggaagagtt accagaatactataggacattttatgctcgacagcttatcagcagaatagagaaaaaattctatgacagcaaggacacgt atggaaacaaagacttactaccagcaactcgtgccacacagatcattgacagggccgtcaaaactcttgaagagttacca gaatactataggacattttatgctcgacagcttatcagcagaatagagaaaaaatgcaaatggatgaaactagctttaga tgcaaaagcgatgtattatatcatcgctttagtgcaaatggtaatgttcacgggaaagggagggcagacgtatcaagtaa aggccagctatagatttaaaattagtaaacaaaagtacacgtatttcaacatttattag |
|
Protein
| Protein ID | pfu_aug2.0_244.1_13862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13862.t1 MSSRIPTVLQGLDIGSCVQKWSSLEYLMKNGGNKQVKIHVSESPQMDFINKNFVYRSLPFDDFVRRASEKTHSEYFISET ENYYLRALGDDPRREIADIHSQFPTLAQDVKFPDLFPREKFFSSVFRIASEGLQLWTHYDIMDNFLMQISGRKKVVLFSP DDVNYLYLNGDKSEVLDVDNPDTDKFPDFYKAQKHVCFLEPGDVLFIPALWFHNVISLDFGVAVNVFWKHLDSQFYDSKD TYGNKDLLPATRATQIIERAVKTLEELPEYYRTFYARQLISRIEKKFYDSKDTYGNKDLLPATRATQIIDRAVKTLEELP EYYRTFYARQLISRIEKKCKWMKLALDAKAMYYIIALVQMVMFTGKGGQTYQVKASYRFKISKQKYTYFNIY |
|