Gene
| Gene Model ID | pfu_aug2.0_244.1_13865 |
|---|---|
| Locus | scaffold244.1 : 244303 ... 247828 : + |
| To GenomeBrowser | scaffold244.1:244303..247828 |
| Genes list of scaffold | scaffold244.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prostaglandin e2 receptor ep4 subtype-like | GO:0004930 GO:0007275 GO:0044763 GO:0048856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_244.1_13865.t1 | 2 | 1 | 7tm_1 | 10 | 60 | 1.9e-27 | 96.0 | 0.16 | 240.0 | 0.6 |
| pfu_aug2.0_244.1_13865.t1 | 1 | 1 | 7TM_GPCR_Srx | 47 | 278 | 1.6e-11 | 43.8 | 1.7e-14 | 2.5e-11 | 43.1 |
| pfu_aug2.0_244.1_13865.t1 | 2 | 2 | 7tm_1 | 56 | 280 | 1.9e-27 | 96.0 | 1.3e-30 | 1.9e-27 | 96.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_244.1_13865.t1 | gi|617418250|ref|XP_007557600.1| | PREDICTED: prostaglandin E2 receptor EP4 subtype-like [Poecilia formosa] | 4.0e-31 |
| pfu_aug2.0_244.1_13865.t1 | gi|118341487|gb|AAI27560.1| | Prostaglandin E receptor 4 (subtype EP4) a [Danio rerio] | 3.0e-30 |
| pfu_aug2.0_244.1_13865.t1 | gi|583989422|ref|XP_006789917.1| | PREDICTED: prostaglandin E2 receptor EP4 subtype-like [Neolamprologus brichardi] | 3.0e-30 |
| pfu_aug2.0_244.1_13865.t1 | gi|88900453|ref|NP_001034718.1| | prostaglandin E receptor 4 (subtype EP4) a [Danio rerio] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_244.1_13865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13865.t1 atggcgacaactacaaatgacacgaatgtaactgacctttggaatttgtccactaccttgaacacaacttcttcgtttca aaatggttcggaacagactcaaggagaaaagaccaaaggatatgtgggaatgatcattttcatgttcattttggcgttag tgttaaattttgccgccatattctcgctggtgaggtcttccacgtaccacaaatggagcgccttctatcgtctgctactg tgtctgacaatatcagattccgtgggaactgtgacctgttttccggttctgctggtaacttatgcgcatgacctagaatg gcagggtggtcaaccggtctgtgactatttagggttcatgattagctttgtatttttgtcatctgcgtcgttcgtctgtg ccatgtctcttgagcgtttcattggcgtctgggcgccattcctgtacaatgacactgagaccagggaacacaggaccacg gctctgatgcttctgatctgggctgtcgtatttattttagcactctgtccaattttcggttttggtgattatgtaatcca gtacccagggtcgtggtgcttttacaattttcatagcgaaggaatctctaaagtatacgctttgctttactctgttattt ggcttttggttatatcttgtactgtaatattcaactcactggtcatcgccaaactagtcaaaagggttttggatcaaaag aagaaaagccaagaatcgggcatcaagaagacgtcaagtaggacaacgagaaatgagatattttccatgatattgttggg tgtcatcgtattggtaacactggtctgtggaatcccgcttgcgcaaacacctgagtctgagcgccaaagtaaggctcgcg tctccgcggctaaaaaagggacgagtatggctaatgataacagggcatactttaatatgtctgggcgttattatcttttc gtacaaaagaaatgtcgacacaaacaatgtaataaaagtttgttcctttatgttattcgattctaa |
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Protein
| Protein ID | pfu_aug2.0_244.1_13865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13865.t1 MATTTNDTNVTDLWNLSTTLNTTSSFQNGSEQTQGEKTKGYVGMIIFMFILALVLNFAAIFSLVRSSTYHKWSAFYRLLL CLTISDSVGTVTCFPVLLVTYAHDLEWQGGQPVCDYLGFMISFVFLSSASFVCAMSLERFIGVWAPFLYNDTETREHRTT ALMLLIWAVVFILALCPIFGFGDYVIQYPGSWCFYNFHSEGISKVYALLYSVIWLLVISCTVIFNSLVIAKLVKRVLDQK KKSQESGIKKTSSRTTRNEIFSMILLGVIVLVTLVCGIPLAQTPESERQSKARVSAAKKGTSMANDNRAYFNMSGRYYLF VQKKCRHKQCNKSLFLYVIRF |
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