Gene
| Gene Model ID | pfu_aug2.0_244.1_13871 |
|---|---|
| Locus | scaffold244.1 : 390729 ... 399213 : - |
| To GenomeBrowser | scaffold244.1:390729..399213 |
| Genes list of scaffold | scaffold244.1 |
| Synonym | pfu_aug1.0_14122.1_32404 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| matrix metalloproteinase-19-like | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_244.1_13871.t1 | 1 | 1 | Peptidase_M10 | 50 | 206 | 0.0 | 191.9 | 0.0 | 0.0 | 191.5 |
| pfu_aug2.0_244.1_13871.t1 | 4 | 1 | Hemopexin | 245 | 276 | 7.6e-23 | 79.9 | 0.0014 | 2.3 | 8.0 |
| pfu_aug2.0_244.1_13871.t1 | 4 | 2 | Hemopexin | 288 | 321 | 7.6e-23 | 79.9 | 3.0e-08 | 5.0e-05 | 22.9 |
| pfu_aug2.0_244.1_13871.t1 | 4 | 3 | Hemopexin | 332 | 376 | 7.6e-23 | 79.9 | 2.4e-13 | 3.9e-10 | 39.3 |
| pfu_aug2.0_244.1_13871.t1 | 4 | 4 | Hemopexin | 379 | 419 | 7.6e-23 | 79.9 | 1.6e-08 | 2.6e-05 | 23.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_244.1_13871.t1 | gi|755986296|ref|XP_011311136.1| | PREDICTED: matrix metalloproteinase-14 isoform X5 [Fopius arisanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_244.1_13871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13871.t1 atggtgggactgccggtgacaggggtacttgacaagcgtacaattaggaaaatgaaatccccgcggtgtggtgtcaaaga tgtcctcccgccaagcaaacggggtgtgtcacgtgatcaacctcaagcgttccatacactgggactaaagtggccaagaa atgaagtcacgtggaagattgtaggttacactggacagcttgctcaatctatacaaagacgagcctattacgacgctttc cggaagtggtcagatgtgacaccactggtgttccgggaagtaaggggaggtaatgccgatattctgataagctacgctcg ttataaccatggcgacgggagctcgtttgatggaaaaggtgggacccttgcccatgcctttttccctggtaagcaatcca tagctggagacacccattttgacgacgacgagaagtggacgatgggcaccaaagaaggaacaaacctggagatcgtagcg gcccacgagtttggacatgctataggaatgagtcattctaatatccaggaagctctgatggcaccatactaccagggata tgatcccaatttccagcttcatagagacgacattgctggaatccaaagtctttatggcagaccaagaaacacaccgcgac caacagcaagaccgagacccacaccaagaccaacagcgccatctggcggtggaagcgactgtgatttgaaattcgatgtt atattcaatggtcatgacaacagactctacgccgtccgtggacgtaacttgtacaggtttaacagggacggtgtgggaat agaaagtggatatcctaaaaacgccaggaaggtctaccaacgatttcctaaaagtccagcagcggctgtccaggatcgct acagaagagtctatgtttttaaagacaagagggtattccgatatactgggttcagactggacgctggctatcctaagaga actatcggtaaaaagaatttcttcagatatccacaagctgccttgatgtggtatgatggtagaatttatcttttcaaggg cgacaagtatagcatatggcgagatgattataaagagcccccacctgggtaccccaaaactatcacttcattctggaggg gagtcccaaacaacgtggaagctgcagtccgctggaaccgatatacctacttcttcaaaggacaaaattacgtcaaactt aatgacagatctagatcaaagtacttcggctatcccaaaaagaaggcagctccatggcttgggtgtggtcaacgcacccc aaagtag |
|
Protein
| Protein ID | pfu_aug2.0_244.1_13871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_244.1_13871.t1 MVGLPVTGVLDKRTIRKMKSPRCGVKDVLPPSKRGVSRDQPQAFHTLGLKWPRNEVTWKIVGYTGQLAQSIQRRAYYDAF RKWSDVTPLVFREVRGGNADILISYARYNHGDGSSFDGKGGTLAHAFFPGKQSIAGDTHFDDDEKWTMGTKEGTNLEIVA AHEFGHAIGMSHSNIQEALMAPYYQGYDPNFQLHRDDIAGIQSLYGRPRNTPRPTARPRPTPRPTAPSGGGSDCDLKFDV IFNGHDNRLYAVRGRNLYRFNRDGVGIESGYPKNARKVYQRFPKSPAAAVQDRYRRVYVFKDKRVFRYTGFRLDAGYPKR TIGKKNFFRYPQAALMWYDGRIYLFKGDKYSIWRDDYKEPPPGYPKTITSFWRGVPNNVEAAVRWNRYTYFFKGQNYVKL NDRSRSKYFGYPKKKAAPWLGCGQRTPK |
|