Gene
| Gene Model ID | pfu_aug2.0_245.1_17169 |
|---|---|
| Locus | scaffold245.1 : 96576 ... 100582 : + |
| To GenomeBrowser | scaffold245.1:96576..100582 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17169.t1 | 1 | 1 | Lectin_C | 35 | 135 | 4.7e-16 | 59.3 | 3.9e-20 | 5.8e-16 | 59.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17169.t1 | gi|524910111|ref|XP_005109938.1| | PREDICTED: C-type mannose receptor 2-like [Aplysia californica] | 1.0e-17 |
| pfu_aug2.0_245.1_17169.t1 | gi|597784637|ref|XP_007255821.1| | PREDICTED: galactose-specific lectin nattectin-like [Astyanax mexicanus] | 5.0e-16 |
| pfu_aug2.0_245.1_17169.t1 | gi|170041471|ref|XP_001848485.1| | salivary C-type lectin [Culex quinquefasciatus] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17169.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17169.t1 atgttccgaatgaaaacgttaaatatttttagtgacgaaattgacaagtctcaacttggcggtagcgtagatatattttc tattccattagataatcttattcaggctagatgtgccatttttggtgcaaagttagcagagattgaaactgctgaggagg atagctttatcagaataaacctacttgattcaggcaggaaggatacattctggataggagggaccgacgctcaaaaagaa ggacactggatatgggtcaaggatcgggtgcaaatatcatattctgactggtcgccaaaccaacccgataacgcgcacaa caatgagcattgcctacagatttgggatgaccaatttaaatggaacgatgatgtgtgcgatagtgaatataattatttgt gtgaggaggaattaggcataaaaaatcacacactaaggaaccaatga |
|
Protein
| Protein ID | pfu_aug2.0_245.1_17169.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17169.t1 MFRMKTLNIFSDEIDKSQLGGSVDIFSIPLDNLIQARCAIFGAKLAEIETAEEDSFIRINLLDSGRKDTFWIGGTDAQKE GHWIWVKDRVQISYSDWSPNQPDNAHNNEHCLQIWDDQFKWNDDVCDSEYNYLCEEELGIKNHTLRNQ |
|