Gene
| Gene Model ID | pfu_aug2.0_245.1_17171 |
|---|---|
| Locus | scaffold245.1 : 113666 ... 117393 : + |
| To GenomeBrowser | scaffold245.1:113666..117393 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | pfu_aug1.0_14810.1_25347 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17171.t1 | 2 | 1 | Galactosyl_T | 40 | 146 | 1.2e-07 | 31.5 | 1.4e-08 | 5.2e-05 | 22.9 |
| pfu_aug2.0_245.1_17171.t1 | 2 | 2 | Galactosyl_T | 578 | 622 | 1.2e-07 | 31.5 | 0.0027 | 9.9 | 5.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17171.t1 | gi|156379603|ref|XP_001631546.1| | predicted protein [Nematostella vectensis] | 6.0e-14 |
| pfu_aug2.0_245.1_17171.t1 | gi|308472708|ref|XP_003098581.1| | hypothetical protein CRE_05084 [Caenorhabditis remanei] | 6.0e-14 |
| pfu_aug2.0_245.1_17171.t1 | gi|308472668|ref|XP_003098561.1| | hypothetical protein CRE_05085 [Caenorhabditis remanei] | 3.0e-13 |
| pfu_aug2.0_245.1_17171.t1 | gi|553180711|ref|XP_005853449.1| | hypothetical protein NGA_0436100 [Nannochloropsis gaditana CCMP526] | 3.0e-13 |
| pfu_aug2.0_245.1_17171.t1 | gi|308510034|ref|XP_003117200.1| | hypothetical protein CRE_02033 [Caenorhabditis remanei] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17171.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17171.t1 atgcgtgtgttgtatagaaaaacacacacgaagccaataggagatactttgcaggatgcagagaacaaaccttttgtcct tgttggcatagtgtctgacgaaaacaattatggccttcgaaatgcgcacagaaaaacttggctgtctcggaaagagttac atgggccataccgggtcaaagtttactttcttctggacatcagcacattggctctaaggattgaacaaagtagatcgcat gacatgttcttctttaactcgacgaactctgcttctgatgtaaatacaggacagagattacatatgtggtttaaatttgc cgccaatacatacccggaagcggaactcgtcctttggatggacgacgaagtattcctttgtgcacctcaagtattcgata gactgagtaaaattagtagtgaaactttgtactatgggtttgttcatccacaaagatgtgtggacgatacttttctcgtt gtgggaatagagctcgtgaagaggatagcagaaaaagtgtactgcggctcacgacgaggagggatatgtacaatgtttat ggaagagcatctttctgatatgggatcgattggtaacaccctctgtcattggttaaaatcctacagtgatattgtatcag tcgctgataatttctacatgcggttgggatacagcgtaacgggggatacagaggcggatcttggaatgcacaaaaccgat ttccataatttctgttctagctacctcatttaccatgaaagcagtgtaagtgacatatttacattttccaaacataattc ccgtcgactgcagccaactatagggcgagaacatacattttctactaataattatatggtcgagaagaaatcattcgatg gcgaaataatacgcaatctacccaatcttagaacagaatatccaaatgaccagattgtgaggcataggaaaactacagga aagaactgcaatatgtgggccgtcttttacccagtgcacaatttcaacattactgatattatagatgttgcagcaaatga tatgtggtgttcaattgtggttgaggactcttatataatcgcggaaaacatttttacagaagcatcctttctaaaagttg ttcgcaatgaatttgtgttcctgtcgtctgcaaagcaaaattcgctttatcccgattttaacagatttgtcactactgga catgtcagtcgtaagaatatagggtatatctatgccatagatcacggagccaaaatgatttgggatgtttctgaatacca tacacggggtaaattccttgttgacaaggcagaacaagatatactcactgtttgtccagaatataaggattttatcatga atccattggatttttacgatatttctcaaaaaccgagaggatttcctttatcgtttgacatatcacaggctaaatcatgt ccaattcgaggcatattaggatcgggaataatgcagcttttcgacccaaaacacccagacgtggggaaaaccaaatcctt agaatctaaaccagagcaaacatttcatgcagccaaaataattccacttcaaataccacattcgattgcaattccactaa attaccattcaacagtatggtccgttgaggcatttccgtancggccttcgaaatgcgcacagaaaaacgtggctgtctcg gaaagagttacatgggccataccggatgtaaatacaggacagagattacacatttggtttaaatttgccgccaatacata cccggaagcggaactcgtcatttggatggacgacgaagtattcctatgcgcacctcaagtattcgatagactgagtaaaa ttagtagtgattctttgtactatgggtttgttcatccacaaagatgtgtggacgatacctttctcgttgtgggaatggag ctcgtgaagaggatagcagacaaagtgtactgcggctcacgacgaggagggatatgtacaatgttcatggaagagcatct ttctgatatgggatcgattggttacaccctctgtcattggttaaaatcctacagtgatattgtaacagtcgctgataatt tctacatgcggttgggatacagcgtaacgggggatacagaggcggatcttggaatgcacaaaactgatttccataatttc tgttctagctacctcctttaccatgaaagcagtgtaagtgacatatttacattttccaaacataattcccgtcgactgca gccaacgatagggcgagaacatacattttctactaataattatatggacgagaagaaatcattcgatggcgaaataatac gcaatctacccaatcttagaacagactatccaaatgaccagattgtgaggcattggaaaactacaggaaagaactgtaat atgtgggccgtcttttacccagtgcacaatttcaacattactgatattatagacgttgcagcaaatgatatgtggtgcgt aattgtggttgaggactcttatataatcgcggaaaacacttttacagaagcatcctttctaaaaattgttcgcaatgaat ttgtgttcctgtcatctgcaaagcaaaattcgctttatcccgattttaacagatttatcactactagacatgtcagtcgt aagaatatagggtatatctatgccatagatcacggagccaaaatgatttgggatatttctgaatatcattcacggggtaa attccttgttgacaaggcagagcaagatatactcactgtttgtccagaatataaggattttatcatgaatccattggatt tttacgatatttctcaaaaaccaagaggatttcctttatcgtttgacatatcacaggctaaatcatgcccgattcgaggc atattaggatcgggaataatgcagcttttcgacccaaaacacccagacgtgaggaaaaccaaatcggtcgaatccaaacc agatcaaacatttcaagcagccaaaataattccacttcaaataccacattcgattgcagttccactaaattatcattcaa cagtatggtccgttgaggcatttccgtatcttttccttccatccaccgtttcatcagacgctgccgatatctggaggggc tatatcgctcaaacattgaataatttctactttgaagtttcatatatgccggtctcatcaacggactttaaatctgtgaa agaaccaaatgatgaccatctcagtgaatcagaagacttgaccaaaaagacagatatgcttatagaactgcttaatgagc tgaggagaaagaattatgatttgaacttggaaactttctatgcggaaatgtacaaaagaggatacatagagagtcctgac attttgctactccatgtttggggtaaaatgttggctaatttaggcatatcttaa |
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Protein
| Protein ID | pfu_aug2.0_245.1_17171.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17171.t1 MRVLYRKTHTKPIGDTLQDAENKPFVLVGIVSDENNYGLRNAHRKTWLSRKELHGPYRVKVYFLLDISTLALRIEQSRSH DMFFFNSTNSASDVNTGQRLHMWFKFAANTYPEAELVLWMDDEVFLCAPQVFDRLSKISSETLYYGFVHPQRCVDDTFLV VGIELVKRIAEKVYCGSRRGGICTMFMEEHLSDMGSIGNTLCHWLKSYSDIVSVADNFYMRLGYSVTGDTEADLGMHKTD FHNFCSSYLIYHESSVSDIFTFSKHNSRRLQPTIGREHTFSTNNYMVEKKSFDGEIIRNLPNLRTEYPNDQIVRHRKTTG KNCNMWAVFYPVHNFNITDIIDVAANDMWCSIVVEDSYIIAENIFTEASFLKVVRNEFVFLSSAKQNSLYPDFNRFVTTG HVSRKNIGYIYAIDHGAKMIWDVSEYHTRGKFLVDKAEQDILTVCPEYKDFIMNPLDFYDISQKPRGFPLSFDISQAKSC PIRGILGSGIMQLFDPKHPDVGKTKSLESKPEQTFHAAKIIPLQIPHSIAIPLNYHSTVWSVEAFPXRPSKCAQKNVAVS ERVTWAIPDVNTGQRLHIWFKFAANTYPEAELVIWMDDEVFLCAPQVFDRLSKISSDSLYYGFVHPQRCVDDTFLVVGME LVKRIADKVYCGSRRGGICTMFMEEHLSDMGSIGYTLCHWLKSYSDIVTVADNFYMRLGYSVTGDTEADLGMHKTDFHNF CSSYLLYHESSVSDIFTFSKHNSRRLQPTIGREHTFSTNNYMDEKKSFDGEIIRNLPNLRTDYPNDQIVRHWKTTGKNCN MWAVFYPVHNFNITDIIDVAANDMWCVIVVEDSYIIAENTFTEASFLKIVRNEFVFLSSAKQNSLYPDFNRFITTRHVSR KNIGYIYAIDHGAKMIWDISEYHSRGKFLVDKAEQDILTVCPEYKDFIMNPLDFYDISQKPRGFPLSFDISQAKSCPIRG ILGSGIMQLFDPKHPDVRKTKSVESKPDQTFQAAKIIPLQIPHSIAVPLNYHSTVWSVEAFPYLFLPSTVSSDAADIWRG YIAQTLNNFYFEVSYMPVSSTDFKSVKEPNDDHLSESEDLTKKTDMLIELLNELRRKNYDLNLETFYAEMYKRGYIESPD ILLLHVWGKMLANLGIS |
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