Gene
| Gene Model ID | pfu_aug2.0_245.1_17172 |
|---|---|
| Locus | scaffold245.1 : 121556 ... 130335 : - |
| To GenomeBrowser | scaffold245.1:121556..130335 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | pfu_aug1.0_759.1_15228 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17172.t1 | 1 | 1 | TM231 | 6 | 214 | 0.0 | 166.4 | 0.0 | 0.0 | 166.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17172.t1 | gi|676450444|ref|XP_009052380.1| | hypothetical protein LOTGIDRAFT_115323 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_245.1_17172.t1 | gi|390340534|ref|XP_003725262.1| | 0.0 | |
| pfu_aug2.0_245.1_17172.t1 | gi|699244575|ref|XP_004226312.2| | PREDICTED: transmembrane protein 231-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_245.1_17172.t1 | gi|260824966|ref|XP_002607438.1| | hypothetical protein BRAFLDRAFT_276659 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_245.1_17172.t1 | gi|585705458|ref|XP_006823640.1| | PREDICTED: transmembrane protein 231-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17172.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17172.t1 atggcactgatacggagattctggataaaggaagaatacttccgtgaggtccctacagtgctgtttaaaaagcaattact acttgttatagaacttgaacaagaaggcagttttctgacttatagcacatttcagagatacaataccttacagcaagaaa atcttcgtgttccatatgtcatgtcgagggaaccagatgagaatggggacggaagagcagatggtttgttactcacagta gaaatgcctcttcaggacacggagagagttgttggagttaaacttcttcttttctttgattacagactttatagatttcc tactttcggtatggagtctttagcatacgtaaatcatgactctgccaaggccggggctcgatatgaagtgtttggtaact tagaactccaacaaaaacaggccctagctcacaggggagttgataccagatacaattcctccattatcaacacagacagt gtttatgcagaaacttatgattttaccaacatattcaaagagtattcatcaaggaatgtgactacagtgctgaatgcccc ttacaattcctgggtcagtggtagaggtcaaggtcaaccttttgtcatcagtacaaatatttcatacacagaggcagttg tattaaagagtacctgccaagacagcattataagtctcaggtttaatagaccattttccgatcttgtcagaaagcacaaa atgtcctag |
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Protein
| Protein ID | pfu_aug2.0_245.1_17172.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17172.t1 MALIRRFWIKEEYFREVPTVLFKKQLLLVIELEQEGSFLTYSTFQRYNTLQQENLRVPYVMSREPDENGDGRADGLLLTV EMPLQDTERVVGVKLLLFFDYRLYRFPTFGMESLAYVNHDSAKAGARYEVFGNLELQQKQALAHRGVDTRYNSSIINTDS VYAETYDFTNIFKEYSSRNVTTVLNAPYNSWVSGRGQGQPFVISTNISYTEAVVLKSTCQDSIISLRFNRPFSDLVRKHK MS |
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