Gene
| Gene Model ID | pfu_aug2.0_245.1_17175 |
|---|---|
| Locus | scaffold245.1 : 248408 ... 257783 : - |
| To GenomeBrowser | scaffold245.1:248408..257783 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | pfu_aug1.0_7061.1_52876 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable tubulin polyglutamylase ttll9-like | GO:0006464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17175.t2 | 1 | 1 | TTL | 10 | 127 | 1.2e-30 | 106.4 | 4.6e-34 | 1.7e-30 | 105.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17175.t2 | gi|557016663|ref|XP_006008759.1| | PREDICTED: probable tubulin polyglutamylase TTLL9 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17175.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17175.t1 atgttttccttaacgtatgaagatgtccatttgactaatgttgctgtacagaagaatgcaccagattatgatccagagaa aggatgtaaatggtcaacacaacaactcaggcaatacttgaccgccaaacatggcgtggaggcggtaaagaaagctttca agagtatagacaacattatagtaaaaagtctccagagtgttcagaagatcatcattaacgataagcactgctttgaaatg tatggatatgacgtcctctttgactccgatctcaaaccttggttaattgaaattaatgcatccccatccctaactgccag tggtaaagaagactacgatctcaaattcggactactgaatgacgtattgaatgtccttgaccttgagaacagactgacgg gtaaggagaagcgtgttggaggttgggacctgttgtgggacgacggaccgattctagcagacgatggcaatatggaatgt tcaaccaatggcggcaatgttactactcctaactcatttttaggttgtcacaatgaacggaaaaagcagctaagggaaat gttcacggcagccatgtcaataaaaaagacttga |
|
| Transcript ID | pfu_aug2.0_245.1_17175.t2 |
| Definition | - |
>pfu_aug2.0_245.1_17175.t2 atggacgctgcacttgagcttcgctcagatgtccatttgactaatgttgctgtacagaagaatgcaccagattatgatcc agagaaaggatgtaaatggtcaacacaacaactcaggcaatacttgaccgccaaacatggcgtggaggcggtaaagaaag ctttcaagagtatagacaacattatagtaaaaagtctccagagtgttcagaagatcatcattaacgataagcactgcttt gaaatgtatggatatgacgtcctctttgactccgatctcaaaccttggttaattgaaattaatgcatccccatccctaac tgccagtggtaaagaagactacgatctcaaattcggactactgaatgacgtattgaatgtccttgaccttgagaacagac tgacgggtaaggagaagcgtgttggaggttgggacctgttgtgggacgacggaccgattctagcagacgatggcaatatg gaatgttcaaccaatggcggcaatgttactactcctaactcatttttaggttgtcacaatgaacggaaaaagcagctaag ggaaatgttcacggcagccatgtcaataaaaaagacttga |
|
Protein
| Protein ID | pfu_aug2.0_245.1_17175.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17175.t1 MFSLTYEDVHLTNVAVQKNAPDYDPEKGCKWSTQQLRQYLTAKHGVEAVKKAFKSIDNIIVKSLQSVQKIIINDKHCFEM YGYDVLFDSDLKPWLIEINASPSLTASGKEDYDLKFGLLNDVLNVLDLENRLTGKEKRVGGWDLLWDDGPILADDGNMEC STNGGNVTTPNSFLGCHNERKKQLREMFTAAMSIKKT |
|
| Protein ID | pfu_aug2.0_245.1_17175.t2 |
| Definition | - |
>pfu_aug2.0_245.1_17175.t2 MDAALELRSDVHLTNVAVQKNAPDYDPEKGCKWSTQQLRQYLTAKHGVEAVKKAFKSIDNIIVKSLQSVQKIIINDKHCF EMYGYDVLFDSDLKPWLIEINASPSLTASGKEDYDLKFGLLNDVLNVLDLENRLTGKEKRVGGWDLLWDDGPILADDGNM ECSTNGGNVTTPNSFLGCHNERKKQLREMFTAAMSIKKT |
|