Gene
| Gene Model ID | pfu_aug2.0_245.1_17177 |
|---|---|
| Locus | scaffold245.1 : 274244 ... 305100 : + |
| To GenomeBrowser | scaffold245.1:274244..305100 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | pfu_aug1.0_953.1_07771 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17177.t1 | 2 | 1 | CD36 | 17 | 410 | 0.0 | 590.1 | 0.0 | 0.0 | 378.6 |
| pfu_aug2.0_245.1_17177.t1 | 2 | 2 | CD36 | 409 | 639 | 0.0 | 590.1 | 0.0 | 0.0 | 212.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17177.t1 | gi|291234879|ref|XP_002737374.1| | PREDICTED: lysosome membrane protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_245.1_17177.t1 | gi|348513687|ref|XP_003444373.1| | PREDICTED: lysosome membrane protein 2-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17177.t1 atggggtgtacaaaatgtagtttaaagttgaagacaaagctgatcctagctggatgactggttatgtcagtattaggagg tgtccttattcctgttgtcgacaaagtggtggaatctatggttaaagagcaagtaattttgaaagaaggcaatgttctgt acaatatatggagagacctaccgatccctatcaatatgcagttttatctgtttgacgtcaagaatccagaagaagttatg cagggtaaaaagccatatgtagaacaaaaaggtccctatacttatagtgaaaagagagtaaagtatgacatagtccacaa tgacaatggtaccgtatcatacaaacagaatagaacatttcactttatcccggaaatgtctgtagggaaagagacagatg agtttactacaccaaatcctgtatattggtccctcatatcagcgttagaatggcagccagcggagctaaacagaatcata acgttcctgatcaagtttatcggggaggacgtatttacaaagaggagtatgtctggaattatctggggacaaaacgatac cgccctgacccttgccatgcagctagctcctagctggttctacactaactttataggatattttatgaataaaaatgcta caaatgatggtgtgtacactatatttagtggccaaaaaggtacaacaggagacattggattcattgataaatataatgga tcaaagtatctagacttctggacttcaccttgggccaacatggtcaatgggtcagatggcaccattgggcctccatatgt ctcaaaatctcgggttccatatgcgtttgcctctgatatatgcaggtctgtaagtgggaaatatacagaggatgttgaat ttaaaggtgtgaacttatggcggtacggtgcagagatgtcatacttagaaaatgctacattaaatccggacaacgcagga ttctgtactccacctggccagtgcttggacactggaatcattaacatcagctcatgtcaaatagttgactttttccatat tcctgtatcgatgtcattgcctcatttctaccttgggtcagacagatacatcaacgctgtatacaacatgaaacctaata aagaggaacatgagactgtgttagacatggaacctcatactggttggattttctcagcagcaaaaagacttcaagtcaac cttcatatgaaacctgttccaggaatagagtatttagacttttggacttcaccttgggccaacatggtcaatgggtcaga tggcaccattgggcctccatatgtctctaaatctcgggttccatatgcatttgcctctgatatatgcaggtctgtaagtg gaaaatataccgaggatgttgaatttaaaggtgtaaacttgtggcgttatggtgcggagatgtcatacttagaaaacgct acgctaaacccggacaacgcaggattctgtactccccccggtcagtgcttggacactggaatcattaacatcagctcgtg ccaaatagttgactttttccacattcctgtatcgatgtcgttacctcatttctacctggggtcagacagatacattaacg ctgtatacaacatgaaacctaataaagaggagcatgagactgttttagacatggaacctcatactggttggattttctca gcagcaaaaagacttcaagtcaaccttcatatgaaacctgttccaggaatagagaatacattaaatattacaccagtatt tctgccagtattttggttaaatgagtctgccaagatagacgataagaacctggcgttgtttaggagcatgttactgaccc ctctgatggttatagaggcgttagagatcgctctcatagcgggaggggcgctggtcatgttgttgacgctggcatacggc ttctataaacacaagaaaggtttcgagatttttgagaagaaatcagaggaacggcgaggtctgctgtcgaacaatgagca aacttctaagtga |
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Protein
| Protein ID | pfu_aug2.0_245.1_17177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17177.t1 MGCTKCSLKLKTKLILAGXLVMSVLGGVLIPVVDKVVESMVKEQVILKEGNVLYNIWRDLPIPINMQFYLFDVKNPEEVM QGKKPYVEQKGPYTYSEKRVKYDIVHNDNGTVSYKQNRTFHFIPEMSVGKETDEFTTPNPVYWSLISALEWQPAELNRII TFLIKFIGEDVFTKRSMSGIIWGQNDTALTLAMQLAPSWFYTNFIGYFMNKNATNDGVYTIFSGQKGTTGDIGFIDKYNG SKYLDFWTSPWANMVNGSDGTIGPPYVSKSRVPYAFASDICRSVSGKYTEDVEFKGVNLWRYGAEMSYLENATLNPDNAG FCTPPGQCLDTGIINISSCQIVDFFHIPVSMSLPHFYLGSDRYINAVYNMKPNKEEHETVLDMEPHTGWIFSAAKRLQVN LHMKPVPGIEYLDFWTSPWANMVNGSDGTIGPPYVSKSRVPYAFASDICRSVSGKYTEDVEFKGVNLWRYGAEMSYLENA TLNPDNAGFCTPPGQCLDTGIINISSCQIVDFFHIPVSMSLPHFYLGSDRYINAVYNMKPNKEEHETVLDMEPHTGWIFS AAKRLQVNLHMKPVPGIENTLNITPVFLPVFWLNESAKIDDKNLALFRSMLLTPLMVIEALEIALIAGGALVMLLTLAYG FYKHKKGFEIFEKKSEERRGLLSNNEQTSK |
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