Gene
| Gene Model ID | pfu_aug2.0_245.1_17181 |
|---|---|
| Locus | scaffold245.1 : 377001 ... 394953 : - |
| To GenomeBrowser | scaffold245.1:377001..394953 |
| Genes list of scaffold | scaffold245.1 |
| Synonym | pfu_aug1.0_53990.1_70782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_245.1_17181.t1 | 1 | 1 | A_deamin | 112 | 272 | 1.0e-20 | 74.3 | 9.1e-25 | 1.3e-20 | 73.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_245.1_17181.t1 | gi|742158213|ref|XP_010882385.1| | PREDICTED: tRNA-specific adenosine deaminase 1 isoform X3 [Esox lucius] | 2.0e-22 |
| pfu_aug2.0_245.1_17181.t1 | gi|742158205|ref|XP_010882383.1| | PREDICTED: tRNA-specific adenosine deaminase 1 isoform X1 [Esox lucius] | 2.0e-22 |
| pfu_aug2.0_245.1_17181.t1 | gi|410907353|ref|XP_003967156.1| | 3.0e-21 | |
| pfu_aug2.0_245.1_17181.t1 | gi|742158209|ref|XP_010882384.1| | PREDICTED: tRNA-specific adenosine deaminase 1 isoform X2 [Esox lucius] | 4.0e-21 |
| pfu_aug2.0_245.1_17181.t1 | gi|390340536|ref|XP_001201634.2| | 8.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_245.1_17181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17181.t1 atgtctagcttcgtgaccggtgtgataccttcacgagtaaatcctgatttgcaggaggagagagatcaggcatcatttaa tgtcacagaattgacacacatcatcgatggaggagcagagaaaaccacgcagaggaagcgaatagatatgtggcagcccc gtcccagaagaaaaggcgcagatgagcttacgctagaggactggattataacaacaacatatgacagtgggcattggagc ttaccttactttgattgtgggggtggtaacatatggatgatgacatacaccacgcccttctttggctttcagaatggatc cttcaaattcaattgcccatacagtcaagactcgatgatgagggctattgttcatagatctgtagatgttggtaaacttc cgcctggatatcatgtgacttttcccagaatccttcagtcctcacgcaaattcctagattcccaggaaaataacaaaact ggagacaaaatatcaccatcagcatctgccattgtttgggtccaaggagaggaaactcctgaagttctagtagaaggaat gaggcaaggtataactaagaaaacactgctaaaggatccctcaaaagccaggtcaaagattagcagtctcagtatgttta acagattcatcaccttactgaatgtttgtactgacaacggtagtgtgcccagatctctgattccatgtttggattatgat tcctacgtcagctttaagtcagcagcagcgtcctaccagactgcctggaaacagctctatgaacactacggtgtgtggag tcataaacctaaagactttctcaacttcaaatcttctatatcaattcatagaaataaagttatagcaatagattttgacc ccgacacaacccctaacatgtggttgtcggatctcattgcaggttctaccattttaatccaaaatttgatgcatttctga |
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Protein
| Protein ID | pfu_aug2.0_245.1_17181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_245.1_17181.t1 MSSFVTGVIPSRVNPDLQEERDQASFNVTELTHIIDGGAEKTTQRKRIDMWQPRPRRKGADELTLEDWIITTTYDSGHWS LPYFDCGGGNIWMMTYTTPFFGFQNGSFKFNCPYSQDSMMRAIVHRSVDVGKLPPGYHVTFPRILQSSRKFLDSQENNKT GDKISPSASAIVWVQGEETPEVLVEGMRQGITKKTLLKDPSKARSKISSLSMFNRFITLLNVCTDNGSVPRSLIPCLDYD SYVSFKSAAASYQTAWKQLYEHYGVWSHKPKDFLNFKSSISIHRNKVIAIDFDPDTTPNMWLSDLIAGSTILIQNLMHF |
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