Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2456.1_22071
Locus scaffold2456.1 : 8516 ... 61445 : +
To GenomeBrowser scaffold2456.1:8516..61445
Genes list of scaffold scaffold2456.1
Synonym pfu_aug1.0_5849.1_02082

Manual annotation
Annotation by Blast2GO
Annotation GO
phosphatidylinositol -bisphosphate 3-kinase catalytic subunit alpha isoform-like GO:0000166 GO:0016310 GO:0016772 GO:0044763

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_2456.1_22071.t1 2 1 Shisa 20 52 6.2e-06 26.5 7.0 15000.0 -6.0
pfu_aug2.0_2456.1_22071.t1 2 2 Shisa 59 138 6.2e-06 26.5 2.9e-09 6.2e-06 26.5
pfu_aug2.0_2456.1_22071.t1 3 1 PI3K_rbd 369 398 4.2e-15 55.5 3.8 8100.0 -3.3
pfu_aug2.0_2456.1_22071.t1 1 1 PI3K_p85B 381 458 4.3e-27 93.3 4.4e-30 9.4e-27 92.2
pfu_aug2.0_2456.1_22071.t1 3 2 PI3K_rbd 531 631 4.2e-15 55.5 9.0e-17 1.9e-13 50.2
pfu_aug2.0_2456.1_22071.t1 1 1 PI3K_C2 649 743 1.8e-24 86.1 2.5e-27 5.2e-24 84.6
pfu_aug2.0_2456.1_22071.t1 1 1 PI3Ka 810 986 0.0 208.4 0.0 0.0 207.3
pfu_aug2.0_2456.1_22071.t1 2 1 PI3_PI4_kinase 1081 1172 1.4e-32 113.0 6.0e-20 1.3e-16 60.8
pfu_aug2.0_2456.1_22071.t1 2 2 PI3_PI4_kinase 1178 1262 1.4e-32 113.0 1.2e-16 2.6e-13 50.0
pfu_aug2.0_2456.1_22071.t1 3 3 PI3K_rbd 1187 1226 4.2e-15 55.5 0.064 140.0 2.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2456.1_22071.t1 gi|676468340|ref|XP_009058178.1| hypothetical protein LOTGIDRAFT_205708 [Lottia gigantea] 0.0
pfu_aug2.0_2456.1_22071.t1 gi|524899805|ref|XP_005106329.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like [Aplysia californica] 0.0
pfu_aug2.0_2456.1_22071.t1 gi|327289427|ref|XP_003229426.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like isoform X1 [Anolis carolinensis] 0.0
pfu_aug2.0_2456.1_22071.t1 gi|637368755|ref|XP_008121625.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like isoform X2 [Anolis carolinensis] 0.0
pfu_aug2.0_2456.1_22071.t1 gi|348543063|ref|XP_003459003.1| PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [Oreochromis niloticus] 0.0

Transcript
Transcript IDpfu_aug2.0_2456.1_22071.t1
Definition-
>pfu_aug2.0_2456.1_22071.t1
atgatgctattgaatttgaagacgttcgcatttgtaccacttgaggtttcggcagcagtctgctatgcaaggctctatac
ttacggaacatactactcagtgtactgtagtacgtcatgctgcggatatacatattaccgatattgctgtcaagagtacg
aagttaacgttggcggaattattggaggaatcgtttgttttatcattgttgtcgtcgtcgtcgttgtcatcattgtttgt
gtcaagaagcaccaagcagcaaggagaacggtagtaactacatcggctgctcaaccatccgtcaccgtcgtgaatgcgag
caaccagcagcaaatgggaggttacggacaaccccagccaggatacggacctcaacctgggtatcccccgcaacctgggt
atcctccgcaacctgggtatggaccgcaacctgggcaagatccgactttttttctcaagggagccttacagagaaaccac
tcaattagtgatatgactgttctgtcaccagacagacactttactttttgtgctgtatacagggatatgatcattatcca
tatttgtcattggtacttgaccaatctacagcctagtaccagcgccttcttaagaattgcattctgcctctctgtgacga
cagaactccatgaccggccctgtccaaacctcaaggtcatcttacagcgaggagacaaagtgaacatgaaaggtggcata
gtgcaggaaaaaaatatcatcttgatagcagaaaagagggccctttcttctctacagaggtttggacagatcccgtcatt
gagtgctgtaatcacagtcagtcagagtgcaattcttaaaaacgcgctggtacaaggcagtagattggtccagtaccaag
ccaccgtcggtctggtaacagagggatcatatccaacgtatccagaaggacaaacccaaacctgtgagctggtacaggat
gataccatgtcactaccgggtaggtttgatgcggggcgaggcaaagccaagttcgatagaacacctagtgaccttgtatc
atcccataccaggtcactagatgactactgtttgacnttatggggtcaccatcttatgccccagcaagtcctggtagatt
gtctgatgccaaatggagtcatcatacagatatatgtgaacagagatgagacattagagaggatcaagtccagtttgtgg
gacgaggccaaattgttccccttatacaacaagcttctagacccggtagcgtatatatttgtcagtattacccaggatgc
tgagaaagaggaattctacgatgaaactagaagattgtgtgacctacgtctatttcagccaattcttcaagttgtcgaac
ccaagggaaatcgagatgagaaaattgtgaactatgaaataggtatgaccatcggtatccctaccagtgattttgatgaa
atgaaggacattgaggtcatgaccttcagacgtaacatcctggagacatgtcgctcggccacggaggaacggcagagaaa
gggacatcacagcctggcatgttacgtttatcctccggatgtggagacgtcagaaatactaccgatacatctacaggaaa
aactcacaaaacaaactccttcaaatcatgtgataatttgtatatggatcgtatctgaagaaggaattaggaacaaattt
agcgtcagtgtgccgcacacgtctcggccgatagatgtgatagccgagacaatacgacggcgaggtcgacttatgaacat
tacaaaggaacaagtagaaggactcatagaaacttatagaacttcttatgctctcaaagtgtgtggatgtgatgaattct
tattagaggattatcctttaagtcagtataaggtgagagaaaacttaatgaagtcaatactatacaggtatttactatct
acagtgtttaattgtgttttgtttcagatctacgtaaaggcgggtatatatcacggtacagaggccctgtgtgagtccca
atgttcgcgggaggtggagtccagtaaccctcggtggaacgagtggctggacttcctgtacctccccgacctgccgcgat
cagcaaggctctgtctctctatatgctcagttataaagaagaaaaacaggaaactaacatatgcccttgcatggggaaac
ctccagatgtttgactttaacgacagacttctgagtgggaaggtcagcttgaacctatggcccatgccccagggaatgga
tgaactactaaatccaataggaattccagggtctaatccagagaaggagacattatgtatagagatagagtttgatagat
ttacccacccaatatcataccccacagaggaccaatttgaacaactagctcacgtcagctccagtacggacagactctca
catctactggaatcaccacagagtttacgcaaggaagaggagattgtagaagatattatgaaacgtgatccattgtcaga
aatatctgaacaggaaaaagaaatcttatggaaaagaagggaatattgccttaaacatgcccactcactgcccaaacttc
tacaggctgtcaaatggaatgacagagaaaatgttgctcaattatacatgttactacagcgatggccggttttacccccg
gaggtcgtgttagaactcctagattgttccttcccagatttacaagtccgtaactacgctgttgagtgtttagatcgggg
actgagcgatgataaactacagctatatctcttacaactagtccaggcgttaaagtttgagccatacttagacaatccta
tcacccggtttctactaaaaagatctcttctcaatcaaaggatcggacagttcttcttctggcatctaaagtcagagatg
catcagacaaatatccgtacccgttttggtcttgttctggaggcgttctgtcgaggttgtggatcatatctaaagatgct
gaccaaacaggtagaggctctggacaaactgaccaaacttactgatgccctcagactggaagtcaaagatgaccgtgatg
aactgatgaagtacctccatgaacagttacagcagcctgactaccatgacgctctacggaactttctgtctccacttaac
aacagctacaggcttggtgaccttacagctggggagtgtttggtgaagatgtcaaagaagcgccctctatggttagtttg
ggacaaccctgatcccctagctgacctgtacttcactacgtataaaatgatcttcaaaaacggagatgatttacgtcagg
acatgttaacactacagctgataagagtgatggacgtattatggaaaaatgaaggattggatttaaggatgattccgtac
ggctgtgtatcgacgggtaaggatataggtatcatagaggtggtacggcaatctaaaacgatcatggccatccaatcaga
gggcggcatgaagagtaatatacagatggatgcacggcagctacataaatggatcaaggagaaaaataaggaaaagttag
tatcatcttatgtatttcatatagactttggacacttcctgaatcacaagaagaagaagtttggtattaatagagagcga
gtaccgttcgtactgactgaggacttcatcagggtcatagctaaaggctcggaccaagctagaaaatctgatgaatttaa
aaaattccaggagctgtgctgtcaggcttaccttatactacgtcagagtgctaacttaatgatcagtctgttcaccatga
tgttgtcgtgcggaatccccgagttacaaacgctcgacgacatcagctatctccggaaaactctccaggtagaaaatacc
gaagaacaagctctcaattacttcatagaacaattccgtagtgcatatggtgaccaatggactactaaagtagactggat
gttccattatttccggcacaaataa

Protein
Protein IDpfu_aug2.0_2456.1_22071.t1
Definition-
>pfu_aug2.0_2456.1_22071.t1
MMLLNLKTFAFVPLEVSAAVCYARLYTYGTYYSVYCSTSCCGYTYYRYCCQEYEVNVGGIIGGIVCFIIVVVVVVVIIVC
VKKHQAARRTVVTTSAAQPSVTVVNASNQQQMGGYGQPQPGYGPQPGYPPQPGYPPQPGYGPQPGQDPTFFLKGALQRNH
SISDMTVLSPDRHFTFCAVYRDMIIIHICHWYLTNLQPSTSAFLRIAFCLSVTTELHDRPCPNLKVILQRGDKVNMKGGI
VQEKNIILIAEKRALSSLQRFGQIPSLSAVITVSQSAILKNALVQGSRLVQYQATVGLVTEGSYPTYPEGQTQTCELVQD
DTMSLPGRFDAGRGKAKFDRTPSDLVSSHTRSLDDYCLXLWGHHLMPQQVLVDCLMPNGVIIQIYVNRDETLERIKSSLW
DEAKLFPLYNKLLDPVAYIFVSITQDAEKEEFYDETRRLCDLRLFQPILQVVEPKGNRDEKIVNYEIGMTIGIPTSDFDE
MKDIEVMTFRRNILETCRSATEERQRKGHHSLACYVYPPDVETSEILPIHLQEKLTKQTPSNHVIICIWIVSEEGIRNKF
SVSVPHTSRPIDVIAETIRRRGRLMNITKEQVEGLIETYRTSYALKVCGCDEFLLEDYPLSQYKVRENLMKSILYRYLLS
TVFNCVLFQIYVKAGIYHGTEALCESQCSREVESSNPRWNEWLDFLYLPDLPRSARLCLSICSVIKKKNRKLTYALAWGN
LQMFDFNDRLLSGKVSLNLWPMPQGMDELLNPIGIPGSNPEKETLCIEIEFDRFTHPISYPTEDQFEQLAHVSSSTDRLS
HLLESPQSLRKEEEIVEDIMKRDPLSEISEQEKEILWKRREYCLKHAHSLPKLLQAVKWNDRENVAQLYMLLQRWPVLPP
EVVLELLDCSFPDLQVRNYAVECLDRGLSDDKLQLYLLQLVQALKFEPYLDNPITRFLLKRSLLNQRIGQFFFWHLKSEM
HQTNIRTRFGLVLEAFCRGCGSYLKMLTKQVEALDKLTKLTDALRLEVKDDRDELMKYLHEQLQQPDYHDALRNFLSPLN
NSYRLGDLTAGECLVKMSKKRPLWLVWDNPDPLADLYFTTYKMIFKNGDDLRQDMLTLQLIRVMDVLWKNEGLDLRMIPY
GCVSTGKDIGIIEVVRQSKTIMAIQSEGGMKSNIQMDARQLHKWIKEKNKEKLVSSYVFHIDFGHFLNHKKKKFGINRER
VPFVLTEDFIRVIAKGSDQARKSDEFKKFQELCCQAYLILRQSANLMISLFTMMLSCGIPELQTLDDISYLRKTLQVENT
EEQALNYFIEQFRSAYGDQWTTKVDWMFHYFRHK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495