Gene
| Gene Model ID | pfu_aug2.0_2462.1_08875 |
|---|---|
| Locus | scaffold2462.1 : 1 ... 23555 : - |
| To GenomeBrowser | scaffold2462.1:1..23555 |
| Genes list of scaffold | scaffold2462.1 |
| Synonym | pfu_aug1.0_1706.1_08073 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2462.1_08875.t1 | 2 | 1 | RNB | 364 | 475 | 8.8e-24 | 84.3 | 4.0e-12 | 5.4e-09 | 35.7 |
| pfu_aug2.0_2462.1_08875.t1 | 2 | 2 | RNB | 631 | 678 | 8.8e-24 | 84.3 | 3.8e-16 | 5.1e-13 | 48.9 |
| pfu_aug2.0_2462.1_08875.t1 | 1 | 1 | AAA_11 | 1220 | 1286 | 2.3e-11 | 43.7 | 5.8e-14 | 7.8e-11 | 42.0 |
| pfu_aug2.0_2462.1_08875.t1 | 1 | 1 | AAA_19 | 1225 | 1285 | 1.7e-07 | 30.9 | 2.3e-10 | 3.1e-07 | 30.0 |
| pfu_aug2.0_2462.1_08875.t1 | 1 | 1 | AAA_12 | 1317 | 1507 | 3.3e-37 | 127.8 | 7.69999e-40 | 1.0e-36 | 126.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2462.1_08875.t1 | gi|675883370|ref|XP_009027187.1| | hypothetical protein HELRODRAFT_68663, partial [Helobdella robusta] | 5.04467e-44 |
Transcript
| Transcript ID | pfu_aug2.0_2462.1_08875.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2462.1_08875.t1 atggaggcgacaggccgcatacaactgacacaacttttccaagccaatgattctgaaaatgatgaggaggaagagcaaga accgatatctatgtttgacttttctaagtcatattacgacaatgaggaggatcagcgcgataaggacgtatttttagata tcatcttacgatcaggtctagagttagatgaaagtgatgaaacagtcaaaaaagcaaatttatcatacaaacaaccagaa gtatacccagacttgaaggaaaagtccgtattgaacctagaaatggaagcaaacccagaaaaatatgtcagaggaattat taggattgaagatggaaatttgtcattttgcgaacctttagatggtggggatgatattactatagaaggtcgttccagcg ctggacaaacattctctgatgacgaagttattgttgaaatcataaagaaagataacacaaggggtaagaaaaaagaaagc gatgtagaaggtttgacaaccgactatacgaacatagaagggaaacagcgccatgagaaagataatgatttgtttcgaat ggaacggtcatgtcgatacggtcacgtggtgagccttgaatcacgaacgagatttcatgatataaaacatccagtttttc tctgtactatggcaatacatggcaatatgatgaacccaatgtgtaaaacggtaccaaaagtttatataatgaaaacaaac gtagaacagagaagtgggacagacgtttatcaatatcagagcaaacataaaagtctgagagtgcattactgtaaagagtt ttcacggaaagagatactgcaaaatatatttgtggtggttgttttgaactgggataaaagaaggcaatatccaataggag tagtgattgatgtccttgagtttggaaaagacgagaaaagttaccagaagctgactgacagattgcatggagtaccaacg atctattcaaaggacgcaatagaggaaacagaaaacatgataaaaaagcccgacgatggacgtctgtttttcctactgga aaaacgtgaaaatgaattgaaatataatcttgaagaaatgcgtgttcaaaatgtggtttctaagagacaattttcgtatc tggaggttgatgatatcctagtcggcgagaaaagagaggacccttatttcaagagtttatctatactttacacgttctct aaggatctcaaagaaaaacgtttaggagcccatgccgatgtttcattacattccgatgaaagtgagatttatcatgcaga tgcacatcaaagtaaatctcttgttgaagaactcatgatttatacaaattacaatatggcaaatattcttctgaaacatt acggtgattgcgttcctattcgcgtgcagaacatcccattaaaggaaaagttagataactggcttgtggatcacacgtac atcaaagacatcatattcagtctgcaaaatcaaattgtttctttagatgctgtcattccatatcagtcaagcagtagaaa ccaatgtcttggtgtcttgtattcatcaaacggtttaataccggataaggaaatggttagaattcgtagagatgtatgga gtaagctggttgccgcctctgaagcaattgatatcgaggacaacgacgtccctacctcatacctcgaatctcttctgaag gacgatcggaggtacccatatcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnntcgtgcatttctcgaattctgcaaatttcaaagcagagcctcatacaaatgttctgctaacgttaatttgaat tctcccagaggacgtcacttctcactcgccgttcatccgtatactcattttacttcaccgctgcggagatatatagacat tgttaatcacagattactccatgctgccatgaaaaaacaaacgaaaccatacattaaagaggaagtccatacactctgtg agaaagcaaatggtaagaaaagaacactggctagctacagaaacgatgtggataatttctctgtcgtaagacaaatttat cattcaccaaaaatgtttgaggcttacataagcaggtttactcagaactcgatttgccttaccatacaagacttttatgg aaaagacattcgtcgatctgaacttaccttagagattccctatcggctactccaactagctaactatcctaaagaaataa gagatcaagtagaaggatctacagcctacaagtttagctgggatcgaaaagtgtatccaggtcctggtatagaattctca acaacatctgcttacttaaagtcttgtaggttcattccaatcaaagagtggcgaaaaatattgaaaaacctcttgattaa agatttcgacgaagctcgaagaatggttctaaaatggagagatattttcgaagaatgtgatgctggtgacgatttaatgc tgtctcaagtcattcgagtgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnntactaacatggagagatattttcaaagaatgtgatgctggtgacgatttaat gctgtctcaagtcattcgagtgaacgatgacactcgacactatttcttcacgagtgaagaacatgacggtgatgaatcat ttcagcttttgaagatatcgttgaatctacaccagaatcaggttgtaaagctgcaagttgtgtccgaaatcaacagaggt caccggataccaacaccgcagtatctctctatcaatgaacatttgtgtttctgcattgagcataatcgagatcctgttga aatattttgtggatacgctacgttacacaccgaaaccttttacgatgacgtagatgattatattttgagatggctgccaa ttattgagatggaatcagtatacggagcagtaaaggagattggccctatcacaattcatggaatggactacaaaattcag gaaggttctggacaatttacacttcctgcagagtactgtctttaccgtggaataaatttgacatcttcaaatatggaagt tatcaacaagattggcaatttctccgccgcacgagattcggacgactgcgttgcaagtgctaactatttgtgcataagat gcgacatcagtgatattaaagattctcaggaattgaacacacaatggattgctcatgcaaagataacacgaataaaggag aatttggtaaaaactgatgaaagatcagaggtcgaaagctacaatgtagacttcatgatactgagctcaactggtgatgg tccaaaaggggatatcaaaggagggacaattgaactcattcaaaaatctatcgttgaaagacgacaagaaacaatcatta agaggcacttagagatctcaccggaccttgcttttaatgttgctctaggaaattgtgctccctttttagatgaaggtttc cacatggcagccacatatactggaaccgatgttcccctatcaaattttgccagaaacaacgaggaccaagatcgagccat acaaatagcgttgacaaatagcttcagcttgattcaaggtcccccagggactggtaaaacagttactggagttaaacttc tttatcttcttcatcgtctcaatcgaagagtgttcccggacaggcggcaaatagtattttgtggaccgtcaaacaaatca atcgacaatgttgcaaggacccccgaatttccatgttaccgaacctgctcaccgttagaatgggacatatgtaaaaaaat gaatcatgattctataatatttttacagaatccaagcatatgcaaatttccatctgacgccttttacgagggaagactga gaacggataatggaaacaagacaagttgggaggtcacatctccgctcagcatctggaaaaatagtcatagtgctaaacat cacgtacctctcgccttcttccacgtggaaggaatagagggcacaatggtgatatctacccacaaaggaaatgaacaatc aaagagtaacaaagccgaaatagaatttgtgatgaagattatcgagtattttcgtcgtcaaaaagtttcattggataaaa taaacgtaatgtcgcagtacaacgctcaatgttctctactgcgagatgaaatacaaaaaaggaatctacccaatctccaa gtcaatactgtggtgtccagtcaaggaggtgaatgggattacgtcatatttagcaccacgcgttcactcccgcgtcatct gatacaaccaaatccaaccactgactggcgttttcgtaaccttggcttcatcgttgacacacatcagataaacgtggcat tgacacgcgcaaggaaaggcttaatcctagtgggtaaccaacatctattaaaagcggatcggacttggagtaatctgatc aacttttacagggagaagggctgtgtgtatgagaatgactctatactcaatcaatga |
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Protein
| Protein ID | pfu_aug2.0_2462.1_08875.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2462.1_08875.t1 MEATGRIQLTQLFQANDSENDEEEEQEPISMFDFSKSYYDNEEDQRDKDVFLDIILRSGLELDESDETVKKANLSYKQPE VYPDLKEKSVLNLEMEANPEKYVRGIIRIEDGNLSFCEPLDGGDDITIEGRSSAGQTFSDDEVIVEIIKKDNTRGKKKES DVEGLTTDYTNIEGKQRHEKDNDLFRMERSCRYGHVVSLESRTRFHDIKHPVFLCTMAIHGNMMNPMCKTVPKVYIMKTN VEQRSGTDVYQYQSKHKSLRVHYCKEFSRKEILQNIFVVVVLNWDKRRQYPIGVVIDVLEFGKDEKSYQKLTDRLHGVPT IYSKDAIEETENMIKKPDDGRLFFLLEKRENELKYNLEEMRVQNVVSKRQFSYLEVDDILVGEKREDPYFKSLSILYTFS KDLKEKRLGAHADVSLHSDESEIYHADAHQSKSLVEELMIYTNYNMANILLKHYGDCVPIRVQNIPLKEKLDNWLVDHTY IKDIIFSLQNQIVSLDAVIPYQSSSRNQCLGVLYSSNGLIPDKEMVRIRRDVWSKLVAASEAIDIEDNDVPTSYLESLLK DDRRYPYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAFLEFCKFQSRASYKCSANVNLN SPRGRHFSLAVHPYTHFTSPLRRYIDIVNHRLLHAAMKKQTKPYIKEEVHTLCEKANGKKRTLASYRNDVDNFSVVRQIY HSPKMFEAYISRFTQNSICLTIQDFYGKDIRRSELTLEIPYRLLQLANYPKEIRDQVEGSTAYKFSWDRKVYPGPGIEFS TTSAYLKSCRFIPIKEWRKILKNLLIKDFDEARRMVLKWRDIFEECDAGDDLMLSQVIRVXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXLTWRDIFKECDAGDDLMLSQVIRVNDDTRHYFFTSEEHDGDESFQLLKISLNLHQNQVVKLQVVSEINRG HRIPTPQYLSINEHLCFCIEHNRDPVEIFCGYATLHTETFYDDVDDYILRWLPIIEMESVYGAVKEIGPITIHGMDYKIQ EGSGQFTLPAEYCLYRGINLTSSNMEVINKIGNFSAARDSDDCVASANYLCIRCDISDIKDSQELNTQWIAHAKITRIKE NLVKTDERSEVESYNVDFMILSSTGDGPKGDIKGGTIELIQKSIVERRQETIIKRHLEISPDLAFNVALGNCAPFLDEGF HMAATYTGTDVPLSNFARNNEDQDRAIQIALTNSFSLIQGPPGTGKTVTGVKLLYLLHRLNRRVFPDRRQIVFCGPSNKS IDNVARTPEFPCYRTCSPLEWDICKKMNHDSIIFLQNPSICKFPSDAFYEGRLRTDNGNKTSWEVTSPLSIWKNSHSAKH HVPLAFFHVEGIEGTMVISTHKGNEQSKSNKAEIEFVMKIIEYFRRQKVSLDKINVMSQYNAQCSLLRDEIQKRNLPNLQ VNTVVSSQGGEWDYVIFSTTRSLPRHLIQPNPTTDWRFRNLGFIVDTHQINVALTRARKGLILVGNQHLLKADRTWSNLI NFYREKGCVYENDSILNQ |
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