Gene
| Gene Model ID | pfu_aug2.0_2462.1_08878 |
|---|---|
| Locus | scaffold2462.1 : 76661 ... 88615 : - |
| To GenomeBrowser | scaffold2462.1:76661..88615 |
| Genes list of scaffold | scaffold2462.1 |
| Synonym | pfu_aug1.0_9928.1_46123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2462.1_08878.t1 | 1 | 1 | Transglut_N | 64 | 123 | 3.6e-06 | 27.0 | 4.9e-10 | 7.3e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2462.1_08878.t1 | gi|260798160|ref|XP_002594068.1| | hypothetical protein BRAFLDRAFT_118802 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2462.1_08878.t1 | gi|524877677|ref|XP_005095536.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase K-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2462.1_08878.t1 | gi|697520065|ref|XP_009686105.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase 4 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_2462.1_08878.t1 | gi|637326223|ref|XP_008113740.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase 4-like [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2462.1_08878.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2462.1_08878.t1 atgcctaggtcgagatttccaggtttgagtccatactctacctttagatggtcaaggcacagggggcgacgatcgagaaa tcgtcgtggaagatttggatttggtgctatgtttggttcactgccagatatagaggaaatcaatgccaccgttgaacacg tggacgaatcggaggaagacgatacacagggtgatcgacctttgcccacggacaatactatcgtgcatatgaaggtatct gacaaggacatcgaagggaaatggcaagctaagttcccagatcctcttcccaaggagaatcgtgtctcactcaccatcac tacgccacctgattgtattgtcggaaaatgggctttccatgtcgccgtgcttgagaaaagggacggtaaaaccgttatag tgaagaatgacagaaaggctaaagatgtttacgtcttgttcaatccttggaataaagatgaccaagtatacatgtcagac gaggaatggagaaacgagtatgtgatgaatgagaatggctatgttttcgttggaagtcaaagaagtcaaagagcaaggcc ctggatttttggtcagtttgaagagaacattctagactgtgccctcgacctgattgatgctgcagaattgaagtataaaa gcagaggaaatccagtcaaagttgtgcgatgcttgactgcatcgacgaatagtttggatcaggaagatgaaaaaggatgt cttgttggaaattggagtggtaaatatgacgatggtacatcacccaccgcgtggataggaagtgtgaagattctacagga gtatttcagagaaaggagatcagtttgctacgggcagtgctgggttttctctggagtctttacaacacgtatcttccagt gtggacctatgccagtggcagccattaaacagggggacataaatgaaggatatgacggctcttttattatggctgaagtt aatgcagacagaattacatggactgtcaacagagctgactttacaccaagcaatccgattataaattcctatggaaaatc agaaaccgaaggcatacaaaatcaggataaaacaggaaccaaaacaaacaaacaaaaacctccaccatatgaaaagaagc gaactcccgatatgggagtaagaccaggtgcccagaaagagtaa |
|
Protein
| Protein ID | pfu_aug2.0_2462.1_08878.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2462.1_08878.t1 MPRSRFPGLSPYSTFRWSRHRGRRSRNRRGRFGFGAMFGSLPDIEEINATVEHVDESEEDDTQGDRPLPTDNTIVHMKVS DKDIEGKWQAKFPDPLPKENRVSLTITTPPDCIVGKWAFHVAVLEKRDGKTVIVKNDRKAKDVYVLFNPWNKDDQVYMSD EEWRNEYVMNENGYVFVGSQRSQRARPWIFGQFEENILDCALDLIDAAELKYKSRGNPVKVVRCLTASTNSLDQEDEKGC LVGNWSGKYDDGTSPTAWIGSVKILQEYFRERRSVCYGQCWVFSGVFTTRIFQCGPMPVAAIKQGDINEGYDGSFIMAEV NADRITWTVNRADFTPSNPIINSYGKSETEGIQNQDKTGTKTNKQKPPPYEKKRTPDMGVRPGAQKE |
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