Gene
| Gene Model ID | pfu_aug2.0_2490.1_02147 |
|---|---|
| Locus | scaffold2490.1 : 20526 ... 26415 : - |
| To GenomeBrowser | scaffold2490.1:20526..26415 |
| Genes list of scaffold | scaffold2490.1 |
| Synonym | pfu_aug1.0_10740.1_68241 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2490.1_02147.t1 | 2 | 1 | DUF4615 | 2 | 148 | 1.2e-33 | 115.9 | 6.7e-37 | 9.9e-33 | 113.0 |
| pfu_aug2.0_2490.1_02147.t1 | 2 | 2 | DUF4615 | 193 | 264 | 1.2e-33 | 115.9 | 0.0014 | 21.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2490.1_02147.t1 | gi|524909171|ref|XP_005109636.1| | PREDICTED: uncharacterized protein LOC101845277 [Aplysia californica] | 1.0e-24 |
| pfu_aug2.0_2490.1_02147.t1 | gi|573898840|ref|XP_006637152.1| | PREDICTED: UPF0488 protein C8orf33 homolog [Lepisosteus oculatus] | 4.0e-18 |
| pfu_aug2.0_2490.1_02147.t1 | gi|727000359|ref|XP_010390378.1| | PREDICTED: UPF0488 protein C8orf33 homolog [Corvus cornix cornix] | 1.0e-17 |
| pfu_aug2.0_2490.1_02147.t1 | gi|675405288|ref|XP_008928262.1| | PREDICTED: UPF0488 protein C8orf33 homolog [Manacus vitellinus] | 4.0e-17 |
| pfu_aug2.0_2490.1_02147.t1 | gi|586559689|ref|XP_006913119.1| | PREDICTED: UPF0488 protein C8orf33 homolog, partial [Pteropus alecto] | 5.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_2490.1_02147.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2490.1_02147.t1 atggtttggtgtgtagaacagttacaattaggactggagaaacagacaccagatagtaggcaagcacttgaggccattaa ggtcctgagaatactacagagtgataaaactccactcatcaagaaaagacaagccatgaggaatacttttggtgactatc gacagaaaatgaaagcagaggagaaaagaatggcatcaaagatgagaagattagaagtgacttctggagatgctggcaaa tcagtgttttatcgtaaaagttcacaagttcagaccactccacaagcaagtatcactggttttaatggtgctgattgtat gactgaaggcttaaaaagtattgacctatcagagggcagcattaatggcattgaccaatcaggacacagagatgatttga aaatcattttcaataaaacagaggaggaatttaaatttaatttcaaaatttcaccttctaacacctgcgaggatggcttg tctatgaaagaaaatcattcggcaaataatgagttgtgcacgactgttggtggaaatgaaaattctataaactgtgtgag tggaaaggaatctgaatgtaattcaaagacatcgtccacaaagagaagtgaagcaacagaaacagaaagaaatgtttcaa aaacagcaagtagtcggggtgttagtgatggtgctcagtataaggatcattgtgaagacacagtgcctgatgtcacatcg tttgtgggaaaaagtgttcataattattttgttggtcatgacaaaagtggaagtgattttaagtttaatttttcagcttc atga |
|
Protein
| Protein ID | pfu_aug2.0_2490.1_02147.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2490.1_02147.t1 MVWCVEQLQLGLEKQTPDSRQALEAIKVLRILQSDKTPLIKKRQAMRNTFGDYRQKMKAEEKRMASKMRRLEVTSGDAGK SVFYRKSSQVQTTPQASITGFNGADCMTEGLKSIDLSEGSINGIDQSGHRDDLKIIFNKTEEEFKFNFKISPSNTCEDGL SMKENHSANNELCTTVGGNENSINCVSGKESECNSKTSSTKRSEATETERNVSKTASSRGVSDGAQYKDHCEDTVPDVTS FVGKSVHNYFVGHDKSGSDFKFNFSAS |
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