Gene
| Gene Model ID | pfu_aug2.0_2490.1_02150 |
|---|---|
| Locus | scaffold2490.1 : 65966 ... 81504 : + |
| To GenomeBrowser | scaffold2490.1:65966..81504 |
| Genes list of scaffold | scaffold2490.1 |
| Synonym | pfu_aug1.0_36646.1_19599 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2490.1_02150.t1 | 1 | 1 | ANF_receptor | 36 | 363 | 3.0e-30 | 105.2 | 1.8e-33 | 5.3e-30 | 104.3 |
| pfu_aug2.0_2490.1_02150.t1 | 1 | 1 | SBP_bac_3 | 405 | 514 | 2.5e-15 | 56.3 | 1.4e-18 | 4.0e-15 | 55.6 |
| pfu_aug2.0_2490.1_02150.t1 | 1 | 1 | Lig_chan-Glu_bd | 414 | 474 | 2.3e-12 | 46.7 | 1.9e-15 | 5.8e-12 | 45.4 |
| pfu_aug2.0_2490.1_02150.t1 | 1 | 1 | Lig_chan | 530 | 632 | 9.0e-35 | 119.5 | 6.8e-38 | 2.0e-34 | 118.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2490.1_02150.t1 | gi|642914333|ref|XP_008201635.1| | PREDICTED: glutamate receptor ionotropic, kainate 2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_2490.1_02150.t1 | gi|641657528|ref|XP_008180381.1| | PREDICTED: glutamate receptor ionotropic, kainate 1 isoform X1 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_2490.1_02150.t1 | gi|572269768|ref|XP_006612897.1| | PREDICTED: glutamate receptor ionotropic, kainate 2-like isoform X4 [Apis dorsata] | 0.0 |
| pfu_aug2.0_2490.1_02150.t1 | gi|572269766|ref|XP_006612896.1| | PREDICTED: glutamate receptor ionotropic, kainate 2-like isoform X3 [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2490.1_02150.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2490.1_02150.t1 atgcacgaagatgttaagaatgcatttatttggactttcggaaaactcaacctacagagtaaaagggaactcctaatggc ccccaaccctcatgtaatggacctcaaggacagcttccgggtctccaaaagagtatgcatggagatagaagctggagcca aaattatttttggaccaagttccacaacgtcaagttcacaagttcaagccatcacaaacgttttagggatacctcacatt cagtttcaccaagatgcagatgacgtcacagcctcaatttccggtccaacattacttcccgggaaacatcacatgacttt gaatttatttccaagtaacagaaagatgaaccaagcacaccgagatttagtggagattttagaatggacatcctacacag tcatttatgattcatttgacggattaattcgcctccaggacgtcctgctttccactgtgagggaggatgtagaggtgatt atacgggaactagataaggaccctaaacagtacggcaagatgtttaaagccatgaaggatagcgcggaatataaactcat cattgactgtgacgtcagcaagatagaaactttcctgtcaaaggatttgtctttggtgaacttggatacattccgtacca ctggagccaatatcacggcgttcagtatagtcagtaaggataacccgctggtcatgaggctgctgggagagtggaaatac gaactgttcaaaacagagagcaacctgtcacctctgagcaaaaataaaaactttgtttcaacggaggttgctttgatata tgatgttttattacagaccgaggttgctttgatgtataatgttttattacagaccgaggttgctttgatgtatgatgcag tgcaggtttttgatagagctttaggaaatttacgaaaagccattaacgtggactttgaccggaagttacattgtaacaga acggataccacgtgggacgatggcaccagtctattaaattatatgaaaacaattgaatttcctggaatgacgggtaaagt gcattttggagatttcggattaagagaccattttgaccttgacattctgaaactgggtcaagaaggattagaaaagattg gcgtttggacctccattggactatcggcaaaacaacgtattaacatcactaaaactcacgtggagcccgtcatattactg gcaaatagaaggctcagggtcgtcacaaaaacggatgatccgtacgtgtttgccagaaacaagaacccggatggaagtat caaatacactggattcgtcattgacattttggatatgatcagcgagcgactaaacttcacctacgatatagtgaaaaatg ctgatgattatggaagctgtacgggtaaaaagtcatgtactgggatgatgaaggaactggttacacataaagcagacctt gctgcggcgggtatgacaataacggcagagagagacgaatatgtggatttcactaagccattcaagaacttgggaattac catactcatcaagaaaccgaaagtaaaagctccaaatctcttcagcttcctggatccatttcatccaaacgtttggatgt tcatggtggctggctttatctgcgtcactataatgcttttcatttctgccagattttctccgtatgaatggaatccggag gagggcagtgaggaatcggacatcgtcgtcaatcagttctccatctctaacagcgtgtggtttaccattggatgtatttt acaacaaggaagtgacctttcacctttagctacctccacgcgtactatagccgttgtgtggtggttcttcaccttaatct taatatcatcctacaccgccaacctggccgccttcctcacgttttctaaagatatgtccacaacgtatgccaaggtgtgg aattttatgaagtccgagcaaggtgtattagtggagagcagtaaggacggtatacagaaagttctggatgatgactacgc cttctttgccgagtctacgtccgtggagtaccatgtacaaagaaagtgtcaactgatgcaacaatcattttgttcggagg tgtgcgaagaattaagatttataatgccttgtcttggactcaagtcacgtgacgatgaaagtgaaagtgaggaaggcata ccggagaacactttactaactcccttgtga |
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Protein
| Protein ID | pfu_aug2.0_2490.1_02150.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2490.1_02150.t1 MHEDVKNAFIWTFGKLNLQSKRELLMAPNPHVMDLKDSFRVSKRVCMEIEAGAKIIFGPSSTTSSSQVQAITNVLGIPHI QFHQDADDVTASISGPTLLPGKHHMTLNLFPSNRKMNQAHRDLVEILEWTSYTVIYDSFDGLIRLQDVLLSTVREDVEVI IRELDKDPKQYGKMFKAMKDSAEYKLIIDCDVSKIETFLSKDLSLVNLDTFRTTGANITAFSIVSKDNPLVMRLLGEWKY ELFKTESNLSPLSKNKNFVSTEVALIYDVLLQTEVALMYNVLLQTEVALMYDAVQVFDRALGNLRKAINVDFDRKLHCNR TDTTWDDGTSLLNYMKTIEFPGMTGKVHFGDFGLRDHFDLDILKLGQEGLEKIGVWTSIGLSAKQRINITKTHVEPVILL ANRRLRVVTKTDDPYVFARNKNPDGSIKYTGFVIDILDMISERLNFTYDIVKNADDYGSCTGKKSCTGMMKELVTHKADL AAAGMTITAERDEYVDFTKPFKNLGITILIKKPKVKAPNLFSFLDPFHPNVWMFMVAGFICVTIMLFISARFSPYEWNPE EGSEESDIVVNQFSISNSVWFTIGCILQQGSDLSPLATSTRTIAVVWWFFTLILISSYTANLAAFLTFSKDMSTTYAKVW NFMKSEQGVLVESSKDGIQKVLDDDYAFFAESTSVEYHVQRKCQLMQQSFCSEVCEELRFIMPCLGLKSRDDESESEEGI PENTLLTPL |
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