Gene
| Gene Model ID | pfu_aug2.0_2495.1_18839 |
|---|---|
| Locus | scaffold2495.1 : 57026 ... 95019 : + |
| To GenomeBrowser | scaffold2495.1:57026..95019 |
| Genes list of scaffold | scaffold2495.1 |
| Synonym | pfu_aug1.0_22984.1_54865 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2495.1_18839.t1 | 4 | 1 | TSP_1 | 211 | 254 | 3.3e-36 | 123.1 | 1.1e-13 | 3.3e-10 | 39.9 |
| pfu_aug2.0_2495.1_18839.t1 | 4 | 2 | TSP_1 | 262 | 310 | 3.3e-36 | 123.1 | 3.8e-17 | 1.1e-13 | 51.0 |
| pfu_aug2.0_2495.1_18839.t1 | 4 | 3 | TSP_1 | 319 | 347 | 3.3e-36 | 123.1 | 2.4e-07 | 0.00072 | 19.6 |
| pfu_aug2.0_2495.1_18839.t1 | 4 | 4 | TSP_1 | 387 | 436 | 3.3e-36 | 123.1 | 4.3e-10 | 1.3e-06 | 28.4 |
| pfu_aug2.0_2495.1_18839.t1 | 2 | 1 | Laminin_G_2 | 474 | 578 | 2.7e-09 | 37.1 | 1.7e-05 | 0.05 | 13.6 |
| pfu_aug2.0_2495.1_18839.t1 | 2 | 1 | Laminin_G_1 | 476 | 576 | 1.0e-05 | 25.5 | 0.017 | 49.0 | 3.9 |
| pfu_aug2.0_2495.1_18839.t1 | 2 | 2 | Laminin_G_1 | 611 | 735 | 1.0e-05 | 25.5 | 3.7e-07 | 0.0011 | 18.9 |
| pfu_aug2.0_2495.1_18839.t1 | 2 | 2 | Laminin_G_2 | 612 | 734 | 2.7e-09 | 37.1 | 1.3e-07 | 0.00039 | 20.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2495.1_18839.t1 | gi|260821553|ref|XP_002606097.1| | hypothetical protein BRAFLDRAFT_88007 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2495.1_18839.t1 | gi|585713189|ref|XP_006825050.1| | PREDICTED: uncharacterized protein LOC102803094 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2495.1_18839.t1 | gi|380019292|ref|XP_003693544.1| | 0.0 | |
| pfu_aug2.0_2495.1_18839.t1 | gi|340715896|ref|XP_003396443.1| | 1.4013e-45 | |
| pfu_aug2.0_2495.1_18839.t1 | gi|350418035|ref|XP_003491702.1| | 4.2039e-45 |
Transcript
| Transcript ID | pfu_aug2.0_2495.1_18839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2495.1_18839.t1 atgacatgccgtgccgaacgattttggtccttacagagaatggctattaataagcttctgcgactcccagccaggacaga agcagctaatgtattgtggcagaaactatcagaggctcttttgtatctgagggtgtcagatagacctaagtttctggtca actgtgggggtaggcctacttgttcagaggacagtgttacagaacaaggaccagggatacagtggaacaaacctccaacc aaagaagagaagttgatggtggttggaatgtttggtcccagtggagttcatgtagtggtaaatgtggggaggagggattt gttaacagaagtaggatctgtagcaacccagtgcccctccactatggtatccagtgtcatggggacagcaagagtcaaag gatttgtagaggaaaatgtccagagagcagggaagcaaaatctagagaaagttctatccatgtcaaggaatacaaagaag atgcctggagaaataactgtaagcattggtgccacaaacacaacaaagaatgatggtagatctatttcttttagagagca ggaccatccagcgtatggagatccttacagtgttatactgaatcctcggcaagagattacatatgagatgtggtctgttt ggacagcctgctccaagtcatgtggctcggggatacgacttagaacaaggaactgtaaagtgaaggagaagccatgttac ggggaggtgatacagaggcagtactgtaacactattgattgtcccatccctggagggtggggagattggcaagcctggac accgtgcagtgtaacgtgtaggactggtatacagaaaaggtaccgtaggtgtgacagtcctctacctcaaaatggtggca catgtctaggacaggcagaaaaagaaaggaaatgcaaaatgaaggagtgtaaagctgaaagcttcagttatggggaatgg gagaaatggtcaaaatgttccaaagaatgcggaatgggaactaaaacacgaaagagatcttgccaagttctgtcatccga tcctgcaacaaagcaaataatggataagagtaatgtcagtaagacatgttctaaaactggatcccagatgacacatactt gtaatcctatgccttgtccagtgaatggtaagtgggcaaattggggtacttggtcaacatgtaatgaagcttgtggactg gggcagcgatacagggatagggcgtgtactgatccagctcctgtcaatggtggatctaattgtgaaggatcaggatcaga tattgctcactgttttacctcaccatgtcaagaatcttctctggttggtgtaaggtttaaaggtactggatttttactgt ataatccgagacacaaggcttcccattttctctccctttacgtattattgacaccaaagacaaagaatggtatgatctta cagagattcaggggatgtaagtctggtatctgttcccacaatgtcaccttgtctttacataatggtgtgccatggctagt tgtcaaagatggaaaacatcaactggacttgatcggaaataaacatgtacaggacagcatatttatttacgtccaaggaa aagatgctacaatgcgagttgatgatggaaaacatgtgattgccaagtttactccagagctgaatgatctattaaattat gatgccaaaatgattgttggtttggacaagaataaaagtgcagaacaagaaccctactcaggataccctgtatttactgg tcgtagcttcatgaaatcaccatttccagagttgtctcatctttcattaaagttgacattttatgccattagccttgatg gggtgttattttttaattatggcttacatcgtggatcatacacttacatggtcataaacaatggtgcactaagggtgtgt ttacaatgtgccaatattaagaaaccagtatgtgaagacatagatataattcaatcccgtgtgtggtaccacattacagt ctttatatcaggcaatgcagctagaataagacttaataacaacactgcggtacagttaacatctgttggtccttcgtaca gaatggagtctcccgtgtggtttggtgttggtgagaaactagataaaattatactgcagacactaacaggacagaagtct ggcctccatggtgtcatccatgatatcaatatcaatggtaacgcagcagaaatgaagggaaaggcattgttagatgatga tggattccttaactccctaggggcaagtatagcagagagagtagacgaggttgtggagcgcactagcagcattgtgacac tgaaatgtgactttacacagtactatagcagagataaacacgctgctgtggagtggttccatggtgatagacgagtcaaa tattcttctgacagaaaaattacaaaaagacttcctggagtaaggaaaatagggtcacttgaactgagaggacctcatca tcaagggatttacctatgtgctgtaagacataatggggtgttgacagtccaacatgcctttgttgttatccgttataacg tcaaacatatgcaagttgacgatgcggccttactgaccacgcagtttacctcaaatattgaaaacataaaacctcttgtg gctaaaatcagacttcgaatttatcgagaaaggacagaaagaaacaaagaaaaagatgaggaaacaaaagagaatgatga tgaagataaggtagaaaaagccaaggaggaagaagaccaagatgttgatggcgtacagctagatgaaatccaagacaaac cagacgatgaagatgaagaaggaaacatagaacaagacatggatggagcaaatttgttgtcccatcgaaagtcaaggagg ggggaatgttcaaaaatcttttccgtagagctatgtgccaggctttctgaaaaacctcttgtggctaaaatcagacttcg aatttatcgagaaaggacggaaagaaacaaagaaaaagatgaggaaacaaaagagaatgatgatgaagataaggtagaaa aagccaaggaggaagaagaccaagatgttgatggcgtacagctagatgaaatccaagacaaaccagacgatgaagatgaa gaagggaacatagaacaagacatggatgaaatagtccaggatgaggaacttgtcacacctgaaggagataaagaaggaga tgaacttgacaatgatgacgagtttgaatctattgtcaggcaagtcaaagttttatcttgtgaggtctctggacttatag cagataaaaaagaatcaccaatggctttagacttttctgcaagatccattccgcacacagtaaagagtgggaatgacttc attgtcccacaatcatctgttaacattcagagaacaattcccaagttttcatctgagaggattcaaatgcaacaaagctc tggtagaatcaggcctgaaagaaaagagtcgccagtcgctgtaaatttttcatcaagatctataccacatacaataaaaa acgacttcattgtcccgagatcatcaattgacatgcaaagaacaattcccaagttttcatctgaggaaattcaattgcta caaaacaaaagtcaagttattaaccaaacactaccagtaacactctccaaaatttcaccagagaaacgagagtctctgtc agcggttcagaaacgtggttcacgttcccaacaacaaacagttcctccaacggtctctcccatctctccgctgagcccta caaaagtagcaagcaaccaaggaagcctctctaagacctcagaccttcctcctcctccctcatcagtcacacaactaggt ttccagagaaaaccatcatcttattcaaagcttaatcctcctcttcctccctccatgccacctgatgtaggactccaagg aaagctgtcttcacattctaagctgcctccttcatccacctccatgccactagatgtaggactccagggaaacatgtctt cacattctaagctgcctcctccacccacttctgtgccaccagatgtaggactccagggaaacatgtcttcacattctaag ctgcctcctccaccgccacagatatcctctgatggatcaacaacttcaactaaaag |
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Protein
| Protein ID | pfu_aug2.0_2495.1_18839.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2495.1_18839.t1 MTCRAERFWSLQRMAINKLLRLPARTEAANVLWQKLSEALLYLRVSDRPKFLVNCGGRPTCSEDSVTEQGPGIQWNKPPT KEEKLMVVGMFGPSGVHVVVNVGRRDLLTEVGSVATQCPSTMVSSVMGTARVKGFVEENVQRAGKQNLEKVLSMSRNTKK MPGEITVSIGATNTTKNDGRSISFREQDHPAYGDPYSVILNPRQEITYEMWSVWTACSKSCGSGIRLRTRNCKVKEKPCY GEVIQRQYCNTIDCPIPGGWGDWQAWTPCSVTCRTGIQKRYRRCDSPLPQNGGTCLGQAEKERKCKMKECKAESFSYGEW EKWSKCSKECGMGTKTRKRSCQVLSSDPATKQIMDKSNVSKTCSKTGSQMTHTCNPMPCPVNGKWANWGTWSTCNEACGL GQRYRDRACTDPAPVNGGSNCEGSGSDIAHCFTSPCQESSLVGVRFKGTGFLLYNPRHKASHFLSLYVLLTPKTKNGMIL QRFRGCKSGICSHNVTLSLHNGVPWLVVKDGKHQLDLIGNKHVQDSIFIYVQGKDATMRVDDGKHVIAKFTPELNDLLNY DAKMIVGLDKNKSAEQEPYSGYPVFTGRSFMKSPFPELSHLSLKLTFYAISLDGVLFFNYGLHRGSYTYMVINNGALRVC LQCANIKKPVCEDIDIIQSRVWYHITVFISGNAARIRLNNNTAVQLTSVGPSYRMESPVWFGVGEKLDKIILQTLTGQKS GLHGVIHDININGNAAEMKGKALLDDDGFLNSLGASIAERVDEVVERTSSIVTLKCDFTQYYSRDKHAAVEWFHGDRRVK YSSDRKITKRLPGVRKIGSLELRGPHHQGIYLCAVRHNGVLTVQHAFVVIRYNVKHMQVDDAALLTTQFTSNIENIKPLV AKIRLRIYRERTERNKEKDEETKENDDEDKVEKAKEEEDQDVDGVQLDEIQDKPDDEDEEGNIEQDMDGANLLSHRKSRR GECSKIFSVELCARLSEKPLVAKIRLRIYRERTERNKEKDEETKENDDEDKVEKAKEEEDQDVDGVQLDEIQDKPDDEDE EGNIEQDMDEIVQDEELVTPEGDKEGDELDNDDEFESIVRQVKVLSCEVSGLIADKKESPMALDFSARSIPHTVKSGNDF IVPQSSVNIQRTIPKFSSERIQMQQSSGRIRPERKESPVAVNFSSRSIPHTIKNDFIVPRSSIDMQRTIPKFSSEEIQLL QNKSQVINQTLPVTLSKISPEKRESLSAVQKRGSRSQQQTVPPTVSPISPLSPTKVASNQGSLSKTSDLPPPPSSVTQLG FQRKPSSYSKLNPPLPPSMPPDVGLQGKLSSHSKLPPSSTSMPLDVGLQGNMSSHSKLPPPPTSVPPDVGLQGNMSSHSK LPPPPPQISSDGSTTSTK |
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