Gene
| Gene Model ID | pfu_aug2.0_2496.1_22084 |
|---|---|
| Locus | scaffold2496.1 : 1 ... 8845 : - |
| To GenomeBrowser | scaffold2496.1:1..8845 |
| Genes list of scaffold | scaffold2496.1 |
| Synonym | pfu_aug1.0_8864.1_38836 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2496.1_22084.t1 | 3 | 1 | Somatomedin_B | 23 | 40 | 5.4e-08 | 32.6 | 2.0e-06 | 0.01 | 15.8 |
| pfu_aug2.0_2496.1_22084.t1 | 1 | 1 | 7tm_2 | 562 | 753 | 4.7e-08 | 32.4 | 1.5e-11 | 7.6e-08 | 31.7 |
| pfu_aug2.0_2496.1_22084.t1 | 3 | 2 | Somatomedin_B | 804 | 820 | 5.4e-08 | 32.6 | 7.4e-05 | 0.37 | 10.8 |
| pfu_aug2.0_2496.1_22084.t1 | 3 | 3 | Somatomedin_B | 1151 | 1173 | 5.4e-08 | 32.6 | 1.6e-06 | 0.0081 | 16.1 |
Transcript
| Transcript ID | pfu_aug2.0_2496.1_22084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2496.1_22084.t1 atggaccgtttctgcaaccccctaaacataacagtacaggaagtttaccctatcagtacatgtcctttttgttactgtga tgatgggtgtgtaacacgaggagactgttgtcccgacaaacgcatgagtagatgtgtcaacacgaccattgtttacggtt ctgcatcagagaggaatggctatatgatagttgatacatgtagcgacgaatcaaacagttcacttctttcattgtgttca cgtgacgtttccctgcaatccatgtttgaactgggcccggtgaccgaccaacaaaccaagtcaagttataagaataaata ttgtgctgagtgcaacaatgttaaaagctacatcccttggactttcgaggtacacgactgtaggtatccgaattttgata tcaattattattcctctctggaatccattgaagcgggtctgatacaatatcgctgtgatttttctttttatccgcctcat gatatttttccagcgagatgtcccatgacgtacacaatagatcagtgtaatgtaacagggctttgggcaaaatggaatga taacatagagaaagcgtgtaaccggtataacgcgccgtaccaaatgttcaaaaatattttttgttacatctgtaattatg gacatgaaaaaacgcttatccccgtagacacatgccatatgaacgatgattttattgagaacaatgaatgcataaatgga ggaaacacacaaagcgttttaccctatgaaaacacagcatgtcggaaatgatttttaccaccccatttattggatgcaga taattcttgccatgatttagtaccggaaaccggaagagaatttccgtactgtgaaacttgtatgtctcagcgatacttgt tttctatacatgatgctattgaaagagcggaagagattttaataccaagaagtttgtcatgtagcaataatcagtatgaa gatctgaaaacgggaaagtgcagggctattcattgttcacctggaaaactctatagaaacaatagttgtgtcccattctt acaaatcacatcaaatctgaactacgctctgtacttcacattgcgtccgacaaatttaacagtaattaaagcgaaaacaa ttcgtgatcttttagttgatctgggtttgtcgtttcgcgtcaaggtttcctcgaaagactttagccaagtaagaagagat tattttgtcgcaactaaggggtgtgcagaaaatatgcactttgtatcattagatgatttcgaaatttacgccttcattca actatccattcccagatttgcttccagaatcgatacagagaagaaacttcgtaattttatgtcgttcacgtattttgaaa tacaattcgaaagtttgatagcaaaaaacttgccaacgactatggacagtatggacaacagtttttgtaaagaatcatcg gctaagaaatataccagcataaacggttacacattcttcttcaacaagttcctaaactgtccacagttatctttgaagta ccctgatgttgatctcctaaatagtcaaatgtcattgaagttgaaccatttggacaagataatgggcgctgtcgacttcc atgttatcaatagcaatgacataagagtttgtatagatgattactatcatgctgaatctacggaactgtctactttgaga tacgcattgaatatattctccttcatttgttcagtcctctctatgatttgccttatagctacattcattatatattgtgt tttctcacaacttcggaccttaccaggaaagaacttgatgacccttacgttgtcattgttctttgcccacctttgtacac agattggtttccaggatttaccgggaagtctttgtatgattattggatgttgtatacattattcatggctcgttgtgttt tgttccagttccaactgctcaatccatatgttgagggcgtttaatgggaaattagttatgtctagtaatgaggagaacgc tgtgaaatacaggaaagctctgattatcgttcttatggttccattaccctttgttcttacttactgtttattagcatatt ataatgcggaaattacaccatacgctagggaagggtgtttcataaatgatattaagtatttggtaatctttttaatctca ccaatccttgtaatgtgtttaatgaatatgctgctgttttgcgtcacattttatcatataagaaaagtacccaaaactga aagcaacctcaagaaacgcaatcgaggtaagaaaacagattgtgaaaagaacattaatttgtcaacgggaatggattcgt atgtgtatgcagagtattgtggagtaaatagtttctgtactgtaccgaatattacattagaggaggttttgcacataact tcctgtcccaattgtttttgtgacgatgcctgtgtatttagaggagactgttgtcctgacaaacacatgggtagatgtgt caacatgaccattgtttacggttcttcgtcagagaggcatgggttcatggtcgttgactcatgtagtgacaaatcaaatt cttcacttctttcattgtgttcacgtgacgtttccctacagtccatgtttgatcttggtcctgtgtccagttgggacacc atgttaagttataagaataaatattgtgctgagtgcaacaatgttaatagcttttttccatggaattttgaggtacacga ctgcaggtatccaaattttgaccttaattattattcctcttttaactctatagaagctggtttgaaacaatttcattgcg atctttccttctatgcgccgtatgactttcttccaagaagatgtgccatcacatacaaaatagatcagtgtaatgtcaca ggtctttgggagacatttgatgatgatatagagaaagcctgtaaccagtattacgctccgtatcaaatgttcaaaaatat tttctgttacatttgcaattatggaaatataaataccttcagcgtaatagattattgccttatgaatggagacaacatat ataaagaattatgtcagagtggacaacatgataagaaggtatatccgtataagaatacgatgtgtagaaaatgtaacaaa atacaagggattcgacttgaattatataaacatgtgcaagattttattgcttactctaactacccataccgaacctccat caccctgatcctcgaagacgtatgttcccttccaaaaaattcaatttattcaaaattgtatctttcggttgcttttggaa atttctgtggtccatttaatgtggatgatttgaaacataatatttcatttgatggtgaggcacattatcacttcgaaaaa cctgtgaatgtttctggtgtagacatgtctggtctgtatggacgatacaaacaatatggcggagaaggttcatggtgctt ttatggcgatagagtaaacgttagtaaaccgtgttcttgtgacaaatactgctatgtgaatagaaattgctgtccagata tgcttcaaattcagcatgtggaatgtactaacaaattggatgatcaaagaaggggatctccaaccacaccagattgcagc attcacagcaaaaccccaaaacacccaatgcaaaaacacagagcagacaagcacagaaagcgacggaaaagggacaagga acaccaacgcataatgcagaaacatcaaacacaaaagactacacataaaccaacgagaccaatgggccgacttaggacgg ccatctgccacgaaaatagcggaaggtgtggttatcctggataa |
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Protein
| Protein ID | pfu_aug2.0_2496.1_22084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2496.1_22084.t1 MDRFCNPLNITVQEVYPISTCPFCYCDDGCVTRGDCCPDKRMSRCVNTTIVYGSASERNGYMIVDTCSDESNSSLLSLCS RDVSLQSMFELGPVTDQQTKSSYKNKYCAECNNVKSYIPWTFEVHDCRYPNFDINYYSSLESIEAGLIQYRCDFSFYPPH DIFPARCPMTYTIDQCNVTGLWAKWNDNIEKACNRYNAPYQMFKNIFCYICNYGHEKTLIPVDTCHMNDDFIENNECING GNTQSVLPYENTACRKXFLPPHLLDADNSCHDLVPETGREFPYCETCMSQRYLFSIHDAIERAEEILIPRSLSCSNNQYE DLKTGKCRAIHCSPGKLYRNNSCVPFLQITSNLNYALYFTLRPTNLTVIKAKTIRDLLVDLGLSFRVKVSSKDFSQVRRD YFVATKGCAENMHFVSLDDFEIYAFIQLSIPRFASRIDTEKKLRNFMSFTYFEIQFESLIAKNLPTTMDSMDNSFCKESS AKKYTSINGYTFFFNKFLNCPQLSLKYPDVDLLNSQMSLKLNHLDKIMGAVDFHVINSNDIRVCIDDYYHAESTELSTLR YALNIFSFICSVLSMICLIATFIIYCVFSQLRTLPGKNLMTLTLSLFFAHLCTQIGFQDLPGSLCMIIGCCIHYSWLVVF CSSSNCSIHMLRAFNGKLVMSSNEENAVKYRKALIIVLMVPLPFVLTYCLLAYYNAEITPYAREGCFINDIKYLVIFLIS PILVMCLMNMLLFCVTFYHIRKVPKTESNLKKRNRGKKTDCEKNINLSTGMDSYVYAEYCGVNSFCTVPNITLEEVLHIT SCPNCFCDDACVFRGDCCPDKHMGRCVNMTIVYGSSSERHGFMVVDSCSDKSNSSLLSLCSRDVSLQSMFDLGPVSSWDT MLSYKNKYCAECNNVNSFFPWNFEVHDCRYPNFDLNYYSSFNSIEAGLKQFHCDLSFYAPYDFLPRRCAITYKIDQCNVT GLWETFDDDIEKACNQYYAPYQMFKNIFCYICNYGNINTFSVIDYCLMNGDNIYKELCQSGQHDKKVYPYKNTMCRKCNK IQGIRLELYKHVQDFIAYSNYPYRTSITLILEDVCSLPKNSIYSKLYLSVAFGNFCGPFNVDDLKHNISFDGEAHYHFEK PVNVSGVDMSGLYGRYKQYGGEGSWCFYGDRVNVSKPCSCDKYCYVNRNCCPDMLQIQHVECTNKLDDQRRGSPTTPDCS IHSKTPKHPMQKHRADKHRKRRKRDKEHQRIMQKHQTQKTTHKPTRPMGRLRTAICHENSGRCGYPG |
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