Gene
| Gene Model ID | pfu_aug2.0_2497.1_25440 |
|---|---|
| Locus | scaffold2497.1 : 22257 ... 30135 : - |
| To GenomeBrowser | scaffold2497.1:22257..30135 |
| Genes list of scaffold | scaffold2497.1 |
| Synonym | pfu_aug1.0_465.1_00316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2497.1_25440.t1 | 1 | 1 | CRAL_TRIO_2 | 35 | 188 | 7.6e-14 | 51.8 | 1.1e-17 | 1.6e-13 | 50.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2497.1_25440.t1 | gi|524875159|ref|XP_005094310.1| | PREDICTED: uncharacterized protein LOC101862859 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2497.1_25440.t1 | gi|676447364|ref|XP_009051384.1| | hypothetical protein LOTGIDRAFT_152610 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2497.1_25440.t1 | gi|390354866|ref|XP_003728427.1| | 8.0e-25 | |
| pfu_aug2.0_2497.1_25440.t1 | gi|632973695|ref|XP_007903278.1| | PREDICTED: uncharacterized protein LOC103186208 [Callorhinchus milii] | 6.0e-11 |
| pfu_aug2.0_2497.1_25440.t1 | gi|554864158|ref|XP_005942150.1| | PREDICTED: uncharacterized protein LOC102297258 isoform X2 [Haplochromis burtoni] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_2497.1_25440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2497.1_25440.t1 atgcaggaaataccggggaatcataaaagaaaactatcaaagaaaatgcaaaggaatgaattaacactagaggacgacct tatcaaacgaaaatggatcatatgtacaggaggaagagacaaattagaaaaccccttgttgacattccaacttccgaaca cactcccgggacagttccaaaaatgttggtcgccagatgacctcattcgtctattatgtcacatggttgatatgatagaa ttgatgacgtgccataaatcagtggccttccttctagctctccataatggatgtagtgaccagaaaataacactcatcat tcaggcaatacagtcactagagattgacagaaaaggcacggtggctgtattgtacattgtgaaaccaaagttatcaacta aacgtaaactcttgaagaaactgttaggaatcaaacgaatgaaggactcaaagtccgtatctgagttcaagacagtgatg gtaaacagtatatcggagctatacagacatattgacaagacaaacctcactgaagatcttggaggcacgatacaatatag acatgatgcctttataaatcttcacagtattttgccgtgcgtggctgtaggagaggacgtacttgatcgacttcaggacg tcagagacaaggtccacctactgagggagtatgacctccacgacaaaacctcacatcaactagtcagtctcagagaggaa ctacatgagaaatactttaccttgatcagagaaagtgatatcattctgacgattgagagatgtaagcaggcgttacatac attagagttatcatccgtggaccgtaagtttgacggtctgctccctccactggtatctggagtggaggtccacatcaagg ctatatatgcgagtttggtccagactcacagtgagctgagtggagtatgggccattgtggagaaggaggtggcggaggaa gtatccatcaaacacacaaacgaggaggctgaacagatttgcatggacattacggaatatttctggccaaacatgtcaca gcatcccaaagtcggagaaaatctttatcaagccaaaacgttcaggagagaattcttgatgaacatatacgaaccagcaa aggaattgctggagagggcgacattgattcttcagaagcttcaacaaagtcaccatcagggtgtgtcaggaagaacaggc gtgcgtgacctggtcattagactgtccagaagcatacatccgtttgcatcaagactgaatgtcattaacaaatcgtatgc ttctgtacaccagcatttccttttgtacaacaaggttgcaatttggtataataaaacgatagcgttcctaccaaactcat tgtttgagagttgccaacagtcacaaagcacagtttcctttatccctgcaccacaagggtggcgacaggttacccggaag ttcctgcatgacaatcccgcacctaaagaggaactcttacattcattggattcttgctcagagactgcttcgtcgaggaa tataaaattgcttgtcagcaggttgcaatttggtataataaaacgatag |
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Protein
| Protein ID | pfu_aug2.0_2497.1_25440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2497.1_25440.t1 MQEIPGNHKRKLSKKMQRNELTLEDDLIKRKWIICTGGRDKLENPLLTFQLPNTLPGQFQKCWSPDDLIRLLCHMVDMIE LMTCHKSVAFLLALHNGCSDQKITLIIQAIQSLEIDRKGTVAVLYIVKPKLSTKRKLLKKLLGIKRMKDSKSVSEFKTVM VNSISELYRHIDKTNLTEDLGGTIQYRHDAFINLHSILPCVAVGEDVLDRLQDVRDKVHLLREYDLHDKTSHQLVSLREE LHEKYFTLIRESDIILTIERCKQALHTLELSSVDRKFDGLLPPLVSGVEVHIKAIYASLVQTHSELSGVWAIVEKEVAEE VSIKHTNEEAEQICMDITEYFWPNMSQHPKVGENLYQAKTFRREFLMNIYEPAKELLERATLILQKLQQSHHQGVSGRTG VRDLVIRLSRSIHPFASRLNVINKSYASVHQHFLLYNKVAIWYNKTIAFLPNSLFESCQQSQSTVSFIPAPQGWRQVTRK FLHDNPAPKEELLHSLDSCSETASSRNIKLLVSRLQFGIIKR |
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