Gene
| Gene Model ID | pfu_aug2.0_2497.1_25442 |
|---|---|
| Locus | scaffold2497.1 : 68080 ... 94840 : - |
| To GenomeBrowser | scaffold2497.1:68080..94840 |
| Genes list of scaffold | scaffold2497.1 |
| Synonym | pfu_aug1.0_12704.1_25069 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2497.1_25442.t1 | 7 | 1 | TSP_1 | 98 | 137 | 8.5e-12 | 45.0 | 3.0e-07 | 0.00075 | 19.5 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 1 | TIL | 105 | 122 | 4.9e-09 | 36.1 | 0.39 | 960.0 | 0.0 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 2 | TSP_1 | 648 | 698 | 8.5e-12 | 45.0 | 1.5e-08 | 3.6e-05 | 23.7 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 3 | TSP_1 | 705 | 753 | 8.5e-12 | 45.0 | 3.2e-11 | 8.0e-08 | 32.2 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 2 | TIL | 712 | 729 | 4.9e-09 | 36.1 | 6.0 | 15000.0 | -10.5 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 3 | TIL | 712 | 740 | 4.9e-09 | 36.1 | 6.0 | 15000.0 | -11.3 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 4 | TSP_1 | 791 | 801 | 8.5e-12 | 45.0 | 3.5 | 8700.0 | -3.1 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 4 | TIL | 798 | 811 | 4.9e-09 | 36.1 | 3.7 | 9100.0 | -3.2 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 5 | TIL | 903 | 930 | 4.9e-09 | 36.1 | 0.00012 | 0.3 | 11.2 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 5 | TSP_1 | 916 | 930 | 8.5e-12 | 45.0 | 6.0 | 15000.0 | -6.2 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 6 | TIL | 940 | 993 | 4.9e-09 | 36.1 | 2.0e-12 | 4.9e-09 | 36.1 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 6 | TSP_1 | 956 | 972 | 8.5e-12 | 45.0 | 4.9 | 12000.0 | -3.6 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 7 | TIL | 1035 | 1061 | 4.9e-09 | 36.1 | 0.36 | 900.0 | 0.1 |
| pfu_aug2.0_2497.1_25442.t1 | 8 | 8 | TIL | 1068 | 1096 | 4.9e-09 | 36.1 | 2.3 | 5600.0 | -2.5 |
| pfu_aug2.0_2497.1_25442.t1 | 7 | 7 | TSP_1 | 1096 | 1107 | 8.5e-12 | 45.0 | 6.0 | 15000.0 | -3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2497.1_25442.t1 | gi|149058424|gb|EDM09581.1| | hemicentin 1 (predicted) [Rattus norvegicus] | 1.0e-28 |
| pfu_aug2.0_2497.1_25442.t1 | gi|733902994|ref|XP_010715030.1| | PREDICTED: IgGFc-binding protein-like [Meleagris gallopavo] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_2497.1_25442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2497.1_25442.t1 gacctccgccgctgccaccaaaaggttatggaacagatgaaccccttataccagacgggtacgatccagcagaacctcag atcccggaggtgtatggtccagcggaacctcaactacctgaaggatatggtccaagcaaacctcaaccgccagagggata tggcccaaacgtacctgaactgcttgatggatatggtccaagcgtacctcaactgccagatggttatggtccaagcaaac ctcaaccgccagatgggtatggtccagaaaatccatctacgattgacggaggttggtctgtatggaagccaggagagtgt tcgaaaacgtgcggtaaagggcgacagaaactagtgcgattctgtaacaatcccaagccaggctacggtggaaaaggatg tgtcggaaagaagttcatggcgaatggtcatattggagttcatatggagaatgttcaaagacatgcggaggtggtgaaca gaccaaaacaaggacatgcaccgggcccaccccgaaatatggtggacgaaaatgttcagggccctcaacaaaaacaagaa gatgtaataccaaaaagtgcccagttgatggcggttggtcggtatggaagcctggaaagtgctcaaaatcatgtggtgga ggaagaaaaaagtttgtgcgttcctgtaataatcctagaccaggatatggtggaagaaaatgtgtggggaaaaggactat gtataaaccatgtaatattcagaaatgtccagttgatggtggatggacgtactggagctcatacggagagtgttcgaatt cctgcggaggaggaacacaaatacaaacaaggacatgctctaaaccatctccccaatatggtggacgtaaatgttctggg ccatcatcccggacaaagaaatgcaacaccaagagttgtccagttgatggtggatggtcggcatggaaacatcgaggctg ctcaaaaccatgtggcggtgggaaacagaagcttgtacgtaaatgtaataatccgagaccaaaatatggtggaagggatt gtgaaggaaaaagtacgatggttagaccttgcaatacgcacccatgtccagttcacggtgaatggacgtactggagttca tatggggactgctcaaaaacatgtggtggaggtgaacaaacaaaaactaggacatgctctggttcaaaacatggtggacg taaatgtcctggaccctcgacaaagacaaggaaatgtaacacaaaggaatgcccagttgatggcgggtggtcctactgga gttcgtacggggagtgctctaaatcatgcggaggaggagaacagatacagacacgatcatgtaccgcaccggctccccaa aatggaggacgtgtctgttccggtccttcaaaacgaacgaagagttgcaatacaaaaaaatgtccagttgacggaggatg gtcagcatggaaggcaggttcctgctcgaaaacatgcggtggcgggcgacagaaacttgtacgctactgcaataatccca aacctgcgtatgggggaaggaagtgttttggaagggatgaaaaacacgtaccttgcaatacacataaatgtccagtccat ggcggatggtcgtcttggggtccatacggagactgttctaaatcttgtggtggaggaatacaaacaaaggaaagagtgtg caatttaccgctccctatatatggaggagatgtatgcccgggaaaaacaacaaaaacacgacgatgtaacactaaaaagt gtccaattcatggagaatggacaccgtggagtccttatggatcatgcactaaatcatgcggagggggaacccaaacacaa aaacgtacctgtacaggtccgaccccagagaatggagggaacaagtgccctggacgatctacaaggaaaagggaatgtaa cgttcaaaatcgatggcggatggtcagcatggaagaaatatggacgctgttctaagaaatgtggcggcggcaaagcggct atagtacgctactgtgacaatcctagacctcgatataacggcaaaatgtgtgaaggaacacatattaagtataaaccatg taatacccatagatgcgcagttcacggcaagtggtcagagtggagttcctatggcgaatgttctaaaacatgcggtggag gaacacaaacacagaaacgaaagtgtaacgaaccaaaatacggcggtagaaaatgcatcgggcgttcctctagggcaaga cggtgtaatacacaaacatgcccaggtatttgtggcgactgtaacggtaaaaaggatgacttgaaaacccaacaaggggt agatgtcacaagggagaaaaatagagattctttaattggaaatagttggcaaataaaagatgttaaagaaactaaaaaat gcactccaccaggtccaccaccaatttgcacggagaaaatgagagaaatggcaatgcgcaatgatgcatgcggcttcata aacccaaagaacaaagaatatagtccgttcaagatatgcatcatgaaagacatagtggtcgctcaggagatttttgagaa ttgcgtgtacgacttttgtacctatgctaagaagacaaagaaggaactgagcattgctatctgcaatgctgtggagggat tcgctgagacgtgtaaggagtttggactgatatcaaagtggagaagtgaaactttttgtccaatgccatgtggcaaaaac caagtatacagttatgagacgaatgcttgtccagctacctgtgtaaatcctgacgcacctaaatcgtgtgaatttccaaa agttgaaggatcaatgccatgtggcaaaaaccaagtatacagttatgagacgaatgcttgtccagctacctgtgtaaatc ctgacgcacctaaatcgtgtgaatttccaaaagttgaaggatgtaagtgtaaagcgggatacgttcttagtgatgacaca tgtgtcaagctaagcagctgtggatgttacagcaatggcagatactacccggtggggaagaaaataaagagatgttacaa agagctacactgtaaattggtgtatggaaagccggtccttaaagttaagaagataacatgtagcaagtattccgtctgta agcagatatatggtcaatacaaatgtgtctgtaaagatggctacacaggagatggacttacttgcaaaccaaaaggatgc ggaggtaaaacgtgtcataagtttgcattttgctacaaggatcaatgtaaatgtagaaatggttactatggagacggtat cgacaattgtgacggtggatgtcaggtaaggagacagagctcaccacaatgtggtgtgtcatatcggttgacgggcacct gccatttcacatcagagatgcgagatgactgtcagtacactgtcgatcttgccaagaacaaatatggaaaggcacgagct gttgtgaaaattaataagaaaatcaaatcgtttgcgtatggattaacgatcaaggactgtgccatgttcacactccgcag tactgcactgatcatacgagaccgggcctgtccagagaaatgcttaggtgccaaatactaa |
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Protein
| Protein ID | pfu_aug2.0_2497.1_25442.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2497.1_25442.t1 PPPLPPKGYGTDEPLIPDGYDPAEPQIPEVYGPAEPQLPEGYGPSKPQPPEGYGPNVPELLDGYGPSVPQLPDGYGPSKP QPPDGYGPENPSTIDGGWSVWKPGECSKTCGKGRQKLVRFCNNPKPGYGGKGCVGKKFMANGHIGVHMENVQRHAEVVNR PKQGHAPGPPRNMVDENVQGPQQKQEDVIPKSAQLMAVGRYGSLESAQNHVVEEEKSLCVPVIILDQDMVEENVWGKGLC INHVIFRNVQLMVDGRTGAHTESVRIPAEEEHKYKQGHALNHLPNMVDVNVLGHHPGQRNATPRVVQLMVDGRHGNIEAA QNHVAVGNRSLYVNVIIRDQNMVEGIVKEKVRWLDLAIRTHVQFTVNGRTGVHMGTAQKHVVEVNKQKLGHALVQNMVDV NVLDPRQRQGNVTQRNAQLMAGGPTGVRTGSALNHAEEENRYRHDHVPHRLPKMEDVSVPVLQNERRVAIQKNVQLTEDG QHGRQVPARKHAVAGDRNLYATAIIPNLRMGEGSVLEGMKNTYLAIHINVQSMADGRLGVHTETVLNLVVEEYKQRKECA IYRSLYMEEMYAREKQQKHDDVTLKSVQFMENGHRGVLMDHALNHAEGEPKHKNVPVQVRPQRMEGTSALDDLQGKGNVT FKIDGGWSAWKKYGRCSKKCGGGKAAIVRYCDNPRPRYNGKMCEGTHIKYKPCNTHRCAVHGKWSEWSSYGECSKTCGGG TQTQKRKCNEPKYGGRKCIGRSSRARRCNTQTCPGICGDCNGKKDDLKTQQGVDVTREKNRDSLIGNSWQIKDVKETKKC TPPGPPPICTEKMREMAMRNDACGFINPKNKEYSPFKICIMKDIVVAQEIFENCVYDFCTYAKKTKKELSIAICNAVEGF AETCKEFGLISKWRSETFCPMPCGKNQVYSYETNACPATCVNPDAPKSCEFPKVEGSMPCGKNQVYSYETNACPATCVNP DAPKSCEFPKVEGCKCKAGYVLSDDTCVKLSSCGCYSNGRYYPVGKKIKRCYKELHCKLVYGKPVLKVKKITCSKYSVCK QIYGQYKCVCKDGYTGDGLTCKPKGCGGKTCHKFAFCYKDQCKCRNGYYGDGIDNCDGGCQVRRQSSPQCGVSYRLTGTC HFTSEMRDDCQYTVDLAKNKYGKARAVVKINKKIKSFAYGLTIKDCAMFTLRSTALIIRDRACPEKCLGAKY |
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