Gene
| Gene Model ID | pfu_aug2.0_25.1_16732 |
|---|---|
| Locus | scaffold25.1 : 492630 ... 493221 : - |
| To GenomeBrowser | scaffold25.1:492630..493221 |
| Genes list of scaffold | scaffold25.1 |
| Synonym | pfu_aug1.0_19301.1_40142 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein toll-like | GO:0007165 GO:0031349 GO:0045087 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_25.1_16732.t1 | 1 | 1 | TIR | 27 | 110 | 2.1e-17 | 62.8 | 3.4e-21 | 2.5e-17 | 62.6 |
| pfu_aug2.0_25.1_16732.t1 | 1 | 1 | TIR_2 | 28 | 131 | 1.8e-09 | 37.6 | 3.4e-13 | 2.5e-09 | 37.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_25.1_16732.t1 | gi|390359034|ref|XP_784955.3| | 9.0e-24 | |
| pfu_aug2.0_25.1_16732.t1 | gi|157107508|ref|XP_001649813.1| | AAEL000633-PA [Aedes aegypti] | 6.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_25.1_16732.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16732.t1 atgacacgtaggagtctgcgaggatattttttattacaaaaccatgacgggagtgaaataaaatgcttcgagttcgatgc cttcgtaagttatgctgaagaggatgctcactttgcgcatgacgccttaaaatcgaaagtacttagtaaatatccatcag ctaaattatgttatcataaggaacattttttaacaggacggagcattcctgaaagcatcgtgaatgcagtaaattgtagc aggaaaaccgtctgcgttttgtctgaacattttcttgcgtcagaatggtgtatctatgagttcaagatggccaatttgga gaagatttataagcgatgtgatcaaaactcacttcttgttctgaaatttggaaatgtcaatcttgatagtttaccagcag acattataatctacctgaaatccaggtcttatatggaaattccgtataatatagacgactgtgatggattctgggatctc atcgttaacgcaatcatggacgaataa |
|
Protein
| Protein ID | pfu_aug2.0_25.1_16732.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16732.t1 MTRRSLRGYFLLQNHDGSEIKCFEFDAFVSYAEEDAHFAHDALKSKVLSKYPSAKLCYHKEHFLTGRSIPESIVNAVNCS RKTVCVLSEHFLASEWCIYEFKMANLEKIYKRCDQNSLLVLKFGNVNLDSLPADIIIYLKSRSYMEIPYNIDDCDGFWDL IVNAIMDE |
|