Gene
| Gene Model ID | pfu_aug2.0_25.1_16733 |
|---|---|
| Locus | scaffold25.1 : 493903 ... 503201 : - |
| To GenomeBrowser | scaffold25.1:493903..503201 |
| Genes list of scaffold | scaffold25.1 |
| Synonym | pfu_aug1.0_15567.1_68871 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_25.1_16733.t1 | 7 | 1 | LRR_8 | 3 | 52 | 1.5e-24 | 85.5 | 0.027 | 57.0 | 3.5 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 1 | LRR_4 | 14 | 31 | 1.8e-20 | 72.0 | 0.052 | 110.0 | 2.5 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 1 | LRR_7 | 19 | 33 | 1.2e-08 | 33.7 | 0.008 | 17.0 | 6.1 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 1 | LRR_1 | 20 | 32 | 1.1e-10 | 39.9 | 0.44 | 940.0 | 0.6 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 2 | LRR_8 | 111 | 132 | 1.5e-24 | 85.5 | 0.14 | 290.0 | 1.3 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 2 | LRR_4 | 111 | 130 | 1.8e-20 | 72.0 | 0.0023 | 4.8 | 6.9 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 2 | LRR_7 | 111 | 128 | 1.2e-08 | 33.7 | 0.0021 | 4.5 | 7.9 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 2 | LRR_1 | 112 | 128 | 1.1e-10 | 39.9 | 0.16 | 350.0 | 1.9 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 3 | LRR_1 | 141 | 153 | 1.1e-10 | 39.9 | 7.0 | 15000.0 | -3.9 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 3 | LRR_8 | 142 | 197 | 1.5e-24 | 85.5 | 1.5e-05 | 0.032 | 13.9 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 3 | LRR_4 | 163 | 199 | 1.8e-20 | 72.0 | 2.3e-05 | 0.049 | 13.2 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 4 | LRR_1 | 163 | 180 | 1.1e-10 | 39.9 | 0.037 | 77.0 | 3.9 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 4 | LRR_8 | 168 | 198 | 1.5e-24 | 85.5 | 2.1e-05 | 0.045 | 13.5 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 3 | LRR_7 | 185 | 198 | 1.2e-08 | 33.7 | 0.0042 | 9.0 | 7.0 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 5 | LRR_1 | 186 | 200 | 1.1e-10 | 39.9 | 0.0018 | 3.9 | 7.8 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 5 | LRR_8 | 215 | 272 | 1.5e-24 | 85.5 | 3.2e-14 | 6.7e-11 | 41.7 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 4 | LRR_4 | 215 | 250 | 1.8e-20 | 72.0 | 7.1e-09 | 1.5e-05 | 24.4 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 6 | LRR_1 | 215 | 236 | 1.1e-10 | 39.9 | 1.9e-05 | 0.041 | 13.8 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 4 | LRR_7 | 215 | 228 | 1.2e-08 | 33.7 | 0.0083 | 18.0 | 6.1 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 5 | LRR_4 | 238 | 276 | 1.8e-20 | 72.0 | 3.1e-10 | 6.5e-07 | 28.8 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 7 | LRR_1 | 238 | 259 | 1.1e-10 | 39.9 | 0.0051 | 11.0 | 6.5 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 5 | LRR_7 | 238 | 252 | 1.2e-08 | 33.7 | 0.069 | 150.0 | 3.3 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 8 | LRR_1 | 261 | 281 | 1.1e-10 | 39.9 | 0.0001 | 0.22 | 11.6 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 6 | LRR_7 | 261 | 275 | 1.2e-08 | 33.7 | 0.00066 | 1.4 | 9.4 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 9 | LRR_1 | 294 | 301 | 1.1e-10 | 39.9 | 4.1 | 8700.0 | -2.4 |
| pfu_aug2.0_25.1_16733.t1 | 1 | 1 | TIR | 305 | 370 | 2.1e-08 | 33.6 | 2.3e-11 | 4.8e-08 | 32.5 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 6 | LRR_8 | 440 | 495 | 1.5e-24 | 85.5 | 3.1e-11 | 6.5e-08 | 32.2 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 10 | LRR_1 | 440 | 454 | 1.1e-10 | 39.9 | 0.13 | 270.0 | 2.2 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 7 | LRR_7 | 442 | 450 | 1.2e-08 | 33.7 | 4.0 | 8500.0 | -2.0 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 8 | LRR_7 | 462 | 475 | 1.2e-08 | 33.7 | 0.01 | 22.0 | 5.8 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 6 | LRR_4 | 462 | 494 | 1.8e-20 | 72.0 | 5.3e-08 | 0.00011 | 21.6 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 11 | LRR_1 | 462 | 482 | 1.1e-10 | 39.9 | 0.00016 | 0.33 | 11.1 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 9 | LRR_7 | 485 | 498 | 1.2e-08 | 33.7 | 0.0085 | 18.0 | 6.1 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 12 | LRR_1 | 485 | 504 | 1.1e-10 | 39.9 | 0.0014 | 2.9 | 8.2 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 10 | LRR_7 | 543 | 555 | 1.2e-08 | 33.7 | 6.8 | 14000.0 | -2.7 |
| pfu_aug2.0_25.1_16733.t1 | 7 | 7 | LRR_8 | 543 | 601 | 1.5e-24 | 85.5 | 7.3e-05 | 0.15 | 11.7 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 7 | LRR_4 | 543 | 558 | 1.8e-20 | 72.0 | 0.068 | 140.0 | 2.1 |
| pfu_aug2.0_25.1_16733.t1 | 8 | 8 | LRR_4 | 543 | 609 | 1.8e-20 | 72.0 | 0.00075 | 1.6 | 8.4 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 13 | LRR_1 | 544 | 566 | 1.1e-10 | 39.9 | 0.22 | 460.0 | 1.5 |
| pfu_aug2.0_25.1_16733.t1 | 11 | 11 | LRR_7 | 594 | 604 | 1.2e-08 | 33.7 | 0.29 | 610.0 | 1.4 |
| pfu_aug2.0_25.1_16733.t1 | 14 | 14 | LRR_1 | 594 | 605 | 1.1e-10 | 39.9 | 0.18 | 370.0 | 1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_25.1_16733.t1 | gi|260832778|ref|XP_002611334.1| | hypothetical protein BRAFLDRAFT_73275 [Branchiostoma floridae] | 1.0e-09 |
| pfu_aug2.0_25.1_16733.t1 | gi|572302955|ref|XP_006617480.1| | PREDICTED: chaoptin-like isoform X3 [Apis dorsata] | 2.0e-09 |
| pfu_aug2.0_25.1_16733.t1 | gi|572302953|ref|XP_006617479.1| | PREDICTED: chaoptin-like isoform X2 [Apis dorsata] | 2.0e-09 |
| pfu_aug2.0_25.1_16733.t1 | gi|572302951|ref|XP_006617478.1| | PREDICTED: chaoptin-like isoform X1 [Apis dorsata] | 3.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_25.1_16733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16733.t1 atggcgaggaatagaatagacatggtagaacaattcacagtacttagtttaccaagttctttgaggaatctatcggtagc atataatcgattaagatttggaccatacattatggagtttattttattagagagtgttcaatttatagatttgagtttga tgtatgccatggacagcccatttagatatccattgataatatgcgatgatgaagacaaaggagaaaacactgattcaact ggaataaccaatgggctttcgccatgtccagaagcgaagaagttcggaaatggacatttacctgatgttcacataattat gcatatggcaccaaacttggaaaccctagtagtcaataattgcaataattgcatcacaagtttgtcaaaaccgtggcaca gtcttattttgaaattctattctttgaaacgaataatctttagtcattctttcttagagtttatacgaggagctgattat tctgggaaacttgaagaggctaatttttcttataatttcatttcagacatcgatgacttattcttcgctacaagcaatct aacaattctggatttgtcatacaacgagttaggcaattatttttcatccaaaagatctctgcaattaagaagccaggcat ttctgcgaatcctgaatctgtctaacaataaactcagtcaaatacaacatgaactgttaaaaggactttctaaactcgaa gttctgaacttaagcgaatcgcaactgaaagaagttaacttttcatttgatggtttgataaacctatcgaccttggacct atctaacaacagattacgaactttatctgaatcaaacatgcaagaattagatcagattagtgaagctgttccattgtcta tcaacttggccgggaacgacattttatgtgcatccggaactgatgttgctgaaaacattgtcaacgccgtaaattgtagc agaaagaccatatgtgttttgacagataatttcctggcgtcagagtggtgcatatacgagttcaaaatggctaatttgga aaagatctacaagcgcggggatcaaaattgccttctcgttttgatgtttggaagtgtaaattcagagcatgtccctgtag acataatggcatatctggaatccaggtttcaaatcggtttgcttagtatattattgtcattggtcatagcatcccaatca cctgaatgcaacagtaaccaggtgtgcgtgtgtacacagattgacaaatataatttcaaagcagattgctcaggaaagaa tctatccgaaattcctatcttcactaaagccgttcttgaaatcgacctcagtcggaatgaaaagctgaaaatcattcgtg aaaacaactctttgccaagtgaactgatgcgattagatttatcgtcatgtaatttacaatctatagaactcggtgccttt caatatttgaaaaatttaacttatcttgacatttcacggaacatggagctcacattgggggttcttccaaatattaccaa tgatttgataggttcagaaatcaaaacgttaaaattcaatgcgatacagttttctgttggtgcaggaataactcttcaat atgaacatttgtgtagattacaaaacacatcgcttcaggaaatagaaatgtcaaagaatagaatagatatggtagaacaa tttacaattcagaatttacctccaacgctgatgaacatttcagtaggtcacaatctattacgatttggattgtatctttt ggaagcaaattttatggcaaatctacgatacttaaacctggatgacatgtacctgttggacaatccatttgaaaatcctc tgagtctaacatgtaaaattacgataaaattaaatcaaattctgttcgcactcaagctggtcttgttccatgtccaaatg aacatacggtctcaaagtcaagcttacatgatagtaaattaa |
|
Protein
| Protein ID | pfu_aug2.0_25.1_16733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16733.t1 MARNRIDMVEQFTVLSLPSSLRNLSVAYNRLRFGPYIMEFILLESVQFIDLSLMYAMDSPFRYPLIICDDEDKGENTDST GITNGLSPCPEAKKFGNGHLPDVHIIMHMAPNLETLVVNNCNNCITSLSKPWHSLILKFYSLKRIIFSHSFLEFIRGADY SGKLEEANFSYNFISDIDDLFFATSNLTILDLSYNELGNYFSSKRSLQLRSQAFLRILNLSNNKLSQIQHELLKGLSKLE VLNLSESQLKEVNFSFDGLINLSTLDLSNNRLRTLSESNMQELDQISEAVPLSINLAGNDILCASGTDVAENIVNAVNCS RKTICVLTDNFLASEWCIYEFKMANLEKIYKRGDQNCLLVLMFGSVNSEHVPVDIMAYLESRFQIGLLSILLSLVIASQS PECNSNQVCVCTQIDKYNFKADCSGKNLSEIPIFTKAVLEIDLSRNEKLKIIRENNSLPSELMRLDLSSCNLQSIELGAF QYLKNLTYLDISRNMELTLGVLPNITNDLIGSEIKTLKFNAIQFSVGAGITLQYEHLCRLQNTSLQEIEMSKNRIDMVEQ FTIQNLPPTLMNISVGHNLLRFGLYLLEANFMANLRYLNLDDMYLLDNPFENPLSLTCKITIKLNQILFALKLVLFHVQM NIRSQSQAYMIVN |
|