Gene
| Gene Model ID | pfu_aug2.0_25.1_16734 |
|---|---|
| Locus | scaffold25.1 : 537776 ... 543946 : - |
| To GenomeBrowser | scaffold25.1:537776..543946 |
| Genes list of scaffold | scaffold25.1 |
| Synonym | pfu_aug1.0_35193.1_48184 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_25.1_16734.t1 | 6 | 1 | LRR_4 | 66 | 104 | 6.7e-15 | 54.3 | 0.00055 | 1.2 | 8.8 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 1 | LRR_1 | 67 | 81 | 1.5e-09 | 36.5 | 0.037 | 78.0 | 3.9 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 1 | LRR_8 | 91 | 123 | 6.6e-24 | 83.4 | 8.2e-08 | 0.00017 | 21.2 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 2 | LRR_8 | 91 | 124 | 6.6e-24 | 83.4 | 8.0e-08 | 0.00017 | 21.2 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 2 | LRR_4 | 91 | 124 | 6.7e-15 | 54.3 | 0.00034 | 0.72 | 9.5 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 2 | LRR_1 | 91 | 107 | 1.5e-09 | 36.5 | 0.023 | 49.0 | 4.5 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 3 | LRR_1 | 114 | 132 | 1.5e-09 | 36.5 | 0.0029 | 6.2 | 7.2 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 3 | LRR_8 | 172 | 230 | 6.6e-24 | 83.4 | 4.4e-05 | 0.094 | 12.4 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 4 | LRR_1 | 173 | 186 | 1.5e-09 | 36.5 | 4.3 | 9100.0 | -2.4 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 3 | LRR_4 | 218 | 231 | 6.7e-15 | 54.3 | 1.2 | 2600.0 | -1.9 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 5 | LRR_1 | 224 | 231 | 1.5e-09 | 36.5 | 7.0 | 15000.0 | -3.4 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 6 | LRR_1 | 294 | 306 | 1.5e-09 | 36.5 | 1.0 | 2100.0 | -0.5 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 4 | LRR_8 | 296 | 306 | 6.6e-24 | 83.4 | 0.98 | 2100.0 | -1.5 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 7 | LRR_1 | 309 | 320 | 1.5e-09 | 36.5 | 7.0 | 15000.0 | -3.2 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 4 | LRR_4 | 337 | 371 | 6.7e-15 | 54.3 | 0.00022 | 0.47 | 10.1 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 8 | LRR_1 | 337 | 354 | 1.5e-09 | 36.5 | 0.1 | 220.0 | 2.5 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 5 | LRR_8 | 340 | 373 | 6.6e-24 | 83.4 | 8.8e-06 | 0.019 | 14.7 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 9 | LRR_1 | 360 | 373 | 1.5e-09 | 36.5 | 0.0036 | 7.7 | 6.9 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 6 | LRR_8 | 390 | 447 | 6.6e-24 | 83.4 | 2.1e-15 | 4.4e-12 | 45.5 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 5 | LRR_4 | 390 | 420 | 6.7e-15 | 54.3 | 2.3e-05 | 0.048 | 13.2 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 10 | LRR_1 | 390 | 411 | 1.5e-09 | 36.5 | 0.00034 | 0.73 | 10.1 |
| pfu_aug2.0_25.1_16734.t1 | 6 | 6 | LRR_4 | 413 | 453 | 6.7e-15 | 54.3 | 6.8e-12 | 1.4e-08 | 34.1 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 11 | LRR_1 | 413 | 433 | 1.5e-09 | 36.5 | 0.0087 | 18.0 | 5.8 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 12 | LRR_1 | 436 | 452 | 1.5e-09 | 36.5 | 0.0014 | 3.0 | 8.2 |
| pfu_aug2.0_25.1_16734.t1 | 13 | 13 | LRR_1 | 469 | 478 | 1.5e-09 | 36.5 | 7.0 | 15000.0 | -3.4 |
| pfu_aug2.0_25.1_16734.t1 | 1 | 1 | TIR | 598 | 733 | 6.3e-18 | 64.5 | 7.2e-21 | 1.5e-17 | 63.3 |
| pfu_aug2.0_25.1_16734.t1 | 1 | 1 | TIR_2 | 599 | 697 | 6.9e-09 | 35.7 | 5.9e-12 | 1.3e-08 | 34.9 |
Transcript
| Transcript ID | pfu_aug2.0_25.1_16734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16734.t1 atgtttggagagaacatagagaattattattttttgtgcttcttcttgttcatacttgaatttccctgtgttgaaacgac ctatccagaacagtgtagtagtaacaagcaatgtacgtgtacaagacttcatgatggttactacaaagcagattgctcta gaaaggatctaacagatattcctttattcgatgaaaatgttgttgttattgatatgagcggaaatgaaaaattgacaaag atagcaggaattatcaaattgccgattcttcttaagaatttagatattaattcctgtaatctacactatatcgaacttgg tgcgttagagaaacagaaaaatcttgaatatcttgatatttcatggaacaaggcactgactctaaatgttctaccaaacg tgaccaatgatttaagtggttcaaatataaaaatattaaaattcaacgcgatccaatgtccgaatggtgctggaataact cttagatatgaacatttgtgtcgattgcaaaaaagttcgctcaaagaaatagagatggccaagaatagaatagatatggt cgagcaatttacgcttcgtagtctaccaaaatccttagtaaaaatgtcggctggattcaacagattacgctttggacctt acttcatggaatttagttccctcgaaagcattcgatatgtcaatttaagcgatatgtacgctatttctagtccttttcga gatccttggataatgtgtgatgattctaaggatgaaacagtcgacgaatatctagtccctaaaggactttcaccctgccc ggaaatgaataagatcgagaataccgcattacttgacaacatagttatcatgtatatgccgccaaaattagagaccatga tcaggaataatttcatcgtatatttgcctgataaatggaataacctaattttgaaatacaactctttgaaaagaacggtt tcacgccataattttctacagtttcttagaggaactgattattctgggaaacttgaagaagccgatttttcttataactt cataagggaaattgatgatttattttttacaacaagcaatttgaccatactagatttgtcatataatttacttggtcact ttttttctaccgaaagatccgttagactattacatcgtcaacaatttttggaaattctgaaattatcaaataacaaactg aataaaattcattatgaaatgtttgaagggctttcaagacttcaagtattaaatttaagtgacactgaactaaaaaatgt acgcttcacgtttcgtggtttgactcaactatcatctttagacctttccaacaacaggattcgagctttttctgatttaa acatgcatgaattagacaagctgagcgaaggaattccattatctataaacttgacctggaacgattttttatgcgcatgt gagactctcgaatttttacaatggatgcaaaggaagcaggcaataaatagcagaataacattgacaaagtttgaaaacta cacgtgttcctttgcagattcgacaaaaagaagttttcatgatatatctaagataatattagatcttaagttaaaatgct cttcaaaaagcacgatattcatcataagtgggtttgtaatctttgcttttataattattgtcatatcgggaattttgtac cgatatcgatggaaattgagatacatatactacatgactcgccggagtctacggggatatttcttacttaaggatcatga tggaagacaaacgaaatgttacgaattcgacgcctttataagttttgccgatgaggatgccacatttgcctatagattgt tgaaatccaaagttcaaagcaagtatccgtcagcaaaattatgctatcattacgagcaattcatagccggaactgatgtt gctgaaaacattgtaaatgcagtaaattgtagcagaagaacaatatgtgttttgacagataatttcctcgcgtctgagtg gtgcatatacgagtttaagatggcaaatttggaaaagatctacagacgtggtgatcagaactctcttattatcctaatgc tcggaagtattcatgcagatcgagtgccagcagacataatgacgttcctgaaatctaggtcttacttagaagttccagat gacatggacgattctgatgttttctgggataatatcataagttcagttatggaggatggttag |
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Protein
| Protein ID | pfu_aug2.0_25.1_16734.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16734.t1 MFGENIENYYFLCFFLFILEFPCVETTYPEQCSSNKQCTCTRLHDGYYKADCSRKDLTDIPLFDENVVVIDMSGNEKLTK IAGIIKLPILLKNLDINSCNLHYIELGALEKQKNLEYLDISWNKALTLNVLPNVTNDLSGSNIKILKFNAIQCPNGAGIT LRYEHLCRLQKSSLKEIEMAKNRIDMVEQFTLRSLPKSLVKMSAGFNRLRFGPYFMEFSSLESIRYVNLSDMYAISSPFR DPWIMCDDSKDETVDEYLVPKGLSPCPEMNKIENTALLDNIVIMYMPPKLETMIRNNFIVYLPDKWNNLILKYNSLKRTV SRHNFLQFLRGTDYSGKLEEADFSYNFIREIDDLFFTTSNLTILDLSYNLLGHFFSTERSVRLLHRQQFLEILKLSNNKL NKIHYEMFEGLSRLQVLNLSDTELKNVRFTFRGLTQLSSLDLSNNRIRAFSDLNMHELDKLSEGIPLSINLTWNDFLCAC ETLEFLQWMQRKQAINSRITLTKFENYTCSFADSTKRSFHDISKIILDLKLKCSSKSTIFIISGFVIFAFIIIVISGILY RYRWKLRYIYYMTRRSLRGYFLLKDHDGRQTKCYEFDAFISFADEDATFAYRLLKSKVQSKYPSAKLCYHYEQFIAGTDV AENIVNAVNCSRRTICVLTDNFLASEWCIYEFKMANLEKIYRRGDQNSLIILMLGSIHADRVPADIMTFLKSRSYLEVPD DMDDSDVFWDNIISSVMEDG |
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