Gene
| Gene Model ID | pfu_aug2.0_25.1_16736 |
|---|---|
| Locus | scaffold25.1 : 575247 ... 578436 : - |
| To GenomeBrowser | scaffold25.1:575247..578436 |
| Genes list of scaffold | scaffold25.1 |
| Synonym | pfu_aug1.0_10400.1_24738 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_25.1_16736.t1 | 2 | 1 | TIR | 24 | 63 | 8.8e-17 | 60.8 | 0.9 | 1700.0 | -1.7 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 1 | LRR_1 | 24 | 39 | 5.2e-06 | 25.7 | 1.9 | 3500.0 | -1.2 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 1 | LRR_4 | 60 | 79 | 2.4e-13 | 49.3 | 0.077 | 140.0 | 2.2 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 1 | LRR_8 | 63 | 117 | 4.2e-19 | 68.0 | 1.9e-09 | 3.4e-06 | 26.6 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 2 | LRR_4 | 64 | 83 | 2.4e-13 | 49.3 | 0.03 | 55.0 | 3.5 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 2 | LRR_1 | 64 | 77 | 5.2e-06 | 25.7 | 0.0025 | 4.7 | 7.6 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 3 | LRR_4 | 85 | 127 | 2.4e-13 | 49.3 | 4.0e-05 | 0.073 | 12.7 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 3 | LRR_1 | 85 | 106 | 5.2e-06 | 25.7 | 0.12 | 220.0 | 2.5 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 4 | LRR_1 | 108 | 128 | 5.2e-06 | 25.7 | 0.017 | 32.0 | 5.1 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 2 | LRR_8 | 166 | 224 | 4.2e-19 | 68.0 | 6.4e-06 | 0.012 | 15.3 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 4 | LRR_4 | 167 | 233 | 2.4e-13 | 49.3 | 0.0003 | 0.56 | 9.9 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 5 | LRR_1 | 167 | 188 | 5.2e-06 | 25.7 | 0.34 | 630.0 | 1.1 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 6 | LRR_1 | 217 | 225 | 5.2e-06 | 25.7 | 0.32 | 590.0 | 1.2 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 5 | LRR_4 | 284 | 324 | 2.4e-13 | 49.3 | 0.016 | 30.0 | 4.3 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 7 | LRR_1 | 284 | 295 | 5.2e-06 | 25.7 | 1.0 | 1900.0 | -0.4 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 3 | LRR_8 | 299 | 314 | 4.2e-19 | 68.0 | 0.28 | 530.0 | 0.4 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 4 | LRR_8 | 309 | 366 | 4.2e-19 | 68.0 | 0.00019 | 0.35 | 10.6 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 8 | LRR_1 | 311 | 323 | 5.2e-06 | 25.7 | 8.0 | 15000.0 | -3.1 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 5 | LRR_8 | 333 | 366 | 4.2e-19 | 68.0 | 0.00011 | 0.21 | 11.3 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 6 | LRR_4 | 333 | 366 | 2.4e-13 | 49.3 | 0.0026 | 4.9 | 6.8 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 9 | LRR_1 | 333 | 345 | 5.2e-06 | 25.7 | 3.5 | 6400.0 | -2.0 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 7 | LRR_4 | 355 | 395 | 2.4e-13 | 49.3 | 0.00054 | 0.99 | 9.1 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 10 | LRR_1 | 355 | 367 | 5.2e-06 | 25.7 | 0.0049 | 9.1 | 6.7 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 6 | LRR_8 | 385 | 442 | 4.2e-19 | 68.0 | 5.9e-12 | 1.1e-08 | 34.6 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 8 | LRR_4 | 385 | 421 | 2.4e-13 | 49.3 | 6.6e-07 | 0.0012 | 18.3 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 11 | LRR_1 | 385 | 406 | 5.2e-06 | 25.7 | 0.00046 | 0.86 | 9.8 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 9 | LRR_4 | 408 | 446 | 2.4e-13 | 49.3 | 2.8e-10 | 5.2e-07 | 29.1 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 12 | LRR_1 | 408 | 429 | 5.2e-06 | 25.7 | 0.0022 | 4.1 | 7.8 |
| pfu_aug2.0_25.1_16736.t1 | 10 | 10 | LRR_4 | 431 | 476 | 2.4e-13 | 49.3 | 0.00014 | 0.26 | 10.9 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 13 | LRR_1 | 431 | 448 | 5.2e-06 | 25.7 | 0.0007 | 1.3 | 9.3 |
| pfu_aug2.0_25.1_16736.t1 | 14 | 14 | LRR_1 | 461 | 472 | 5.2e-06 | 25.7 | 1.1 | 2000.0 | -0.5 |
| pfu_aug2.0_25.1_16736.t1 | 2 | 2 | TIR | 593 | 698 | 8.8e-17 | 60.8 | 1.9e-19 | 3.5e-16 | 58.8 |
| pfu_aug2.0_25.1_16736.t1 | 1 | 1 | TIR_2 | 593 | 691 | 2.5e-09 | 37.1 | 2.6e-12 | 4.8e-09 | 36.2 |
| pfu_aug2.0_25.1_16736.t1 | 7 | 7 | LRR_8 | 682 | 713 | 4.2e-19 | 68.0 | 1.2 | 2100.0 | -1.5 |
Transcript
| Transcript ID | pfu_aug2.0_25.1_16736.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16736.t1 atggagaggcatagattttggatatgctttgtcatctatcaattcttgtcggtaaaagcgacacagtcgcttacgtgtag tagtaacaggagatgtgaatgctccaggattaaagataacaagttaaaggcagattgctcgaggagacagttgtcagaaa ttccaagattcgatcacagcgtagttgatattgatcttagtggaaatgaaaacctttccaaaattcctgcaataaactat ctgccatctcgactcatcagattagatgcaacgttgtgtaatctacagcatatagaacttggtgcattacaaggactgaa aaatctttattatctagacatatcatggaatcctgagcttaccctggacgttctatcgaacataacaaatgatttgattg gttcaaatatcaaaacattgaaatttaatgcaatacagtgttccgaaggggcaggtaaaaccctcaagttcgaacacttg tgtcgtttacaaaattcctcacttcaggaaatagaactagctaaaaatagaatagatatgatagaacagcacgttcttcg tagtctaccatcttctttgaaagatatttcagcgggtatcaatagactcagatttggatcctacatgttagaaatcagtt ccttggaaaatcttcgatttctaaatctgagcgatatgtatgcgatgaataatccattcgaacacccttggagtgtaaaa tgtatggacaagaaaactgaaacatccgtcggaacgtccagaatgttgatgccctgttcaaagtcgaatattgatgaaaa tgaatctgaacaactccctgatagtaaagtcattatgtatatgccttccaaattagaaactctcgtaatgaataattgta tcattcgagtaacaaaaaaattgaataagctagttttgaaatatccttcacttaagagagtgtttgctaacaataacttt ttacgatatttgaatggatatgatcattccttaagactcgaggaggcctacttatccaacagttttatagaagaaactga tgatttattcttcagaacgagtaatttaactatattagatctgtcatataacttactgggtgaacattttaccaaacaac gttctgctgaacaattacaaagtcaaaaatttctcaaaattctgaatttgtcttataacagacttcattattcgccattt gatcttttcaaaggtttgatacaactagaagtgctaaatgtgagtgggacggaactgaagaaaatacactttacctttag ttctttgataaatctcaaaacctttgatctatccgacaataggattcgaacattgtccgattctaacatgcgggaattcg atgatttaagtacgaaaacattattatttatcaacttgacaggtaatgatattatatgtacttgtgagaccttaacatcc ttaaaatggatgcaaaataagcaacataaagatagtaaaataaattttacaaacttcgaagagtacacatgctctttcat caattctacgcagaaaagttttcgtcatatttctgaaataataatggatcttgagaaaacatgctctaccaaaagcataa ttttcatcatcagtggaattttgatacttttatttattattatcgtcatatcggggattttgtatcgatatcgatggaaa ttaagatacatttatcacatgacgcgacgaagtcttagaggctactttttgcttcaaaacgacgacgggagcgaacggaa atgtttcgaatttgacgtatttataagttatgctgatgaagataataactttgcatatacaactttaaaatcgaaagtac aaagcaaaaatccagcagcgaaactatgttatcataaagaacagtttataccaggaagtgacgtagctgaaaacattgtc aatgcagtaaactgtagcagaaaaaccgtctgcgtgttgtctgagtattttcttgcatcagagtggtgtatctatgaatt taagatggccaatttggagaaaatctacaaacgtggagatcaaaattcacttattatcctgatgcttggaagcatcaata cagaaagcgtaccagcagacataatgacctacctgaattccaggtcttacctagaagttcccagcaatattgacgagttt gacgtttactgggaccacatcattagtgttatcattgatgaataa |
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Protein
| Protein ID | pfu_aug2.0_25.1_16736.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16736.t1 MERHRFWICFVIYQFLSVKATQSLTCSSNRRCECSRIKDNKLKADCSRRQLSEIPRFDHSVVDIDLSGNENLSKIPAINY LPSRLIRLDATLCNLQHIELGALQGLKNLYYLDISWNPELTLDVLSNITNDLIGSNIKTLKFNAIQCSEGAGKTLKFEHL CRLQNSSLQEIELAKNRIDMIEQHVLRSLPSSLKDISAGINRLRFGSYMLEISSLENLRFLNLSDMYAMNNPFEHPWSVK CMDKKTETSVGTSRMLMPCSKSNIDENESEQLPDSKVIMYMPSKLETLVMNNCIIRVTKKLNKLVLKYPSLKRVFANNNF LRYLNGYDHSLRLEEAYLSNSFIEETDDLFFRTSNLTILDLSYNLLGEHFTKQRSAEQLQSQKFLKILNLSYNRLHYSPF DLFKGLIQLEVLNVSGTELKKIHFTFSSLINLKTFDLSDNRIRTLSDSNMREFDDLSTKTLLFINLTGNDIICTCETLTS LKWMQNKQHKDSKINFTNFEEYTCSFINSTQKSFRHISEIIMDLEKTCSTKSIIFIISGILILLFIIIVISGILYRYRWK LRYIYHMTRRSLRGYFLLQNDDGSERKCFEFDVFISYADEDNNFAYTTLKSKVQSKNPAAKLCYHKEQFIPGSDVAENIV NAVNCSRKTVCVLSEYFLASEWCIYEFKMANLEKIYKRGDQNSLIILMLGSINTESVPADIMTYLNSRSYLEVPSNIDEF DVYWDHIISVIIDE |
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