Gene
| Gene Model ID | pfu_aug2.0_25.1_16739 |
|---|---|
| Locus | scaffold25.1 : 612977 ... 625081 : + |
| To GenomeBrowser | scaffold25.1:612977..625081 |
| Genes list of scaffold | scaffold25.1 |
| Synonym | pfu_aug1.0_298162.1_64961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_25.1_16739.t1 | 1 | 1 | Cofilin_ADF | 10 | 128 | 4.2e-12 | 46.0 | 6.7e-16 | 5.0e-12 | 45.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_25.1_16739.t1 | gi|260781473|ref|XP_002585834.1| | hypothetical protein BRAFLDRAFT_116725 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_25.1_16739.t1 | gi|676494563|ref|XP_009066602.1| | hypothetical protein LOTGIDRAFT_203293 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_25.1_16739.t1 | gi|584018556|ref|XP_006803996.1| | PREDICTED: coactosin-like protein-like [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_25.1_16739.t1 | gi|348503760|ref|XP_003439431.1| | PREDICTED: coactosin-like protein-like [Oreochromis niloticus] | 1.4013e-45 |
| pfu_aug2.0_25.1_16739.t1 | gi|734644905|ref|XP_010751514.1| | PREDICTED: coactosin-like protein [Larimichthys crocea] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_25.1_16739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16739.t1 atggcaaaattaagcgacaaaaattcgatgcaggaagcatattccaatgtaaggaatgacactgtcgatatgaactggtt agtgctaggatacaaggataacgaaattgtcttggaagataccggaacagattttagcgagtttgcatcaaaattctcag atgacgagaggaagtatggttttcttagagtagtagcgggagatgaacttagcaagcgcgctaaatttgcccttatacag tggcttggtcataacgtgtccgctataaaaagggcgaggatggccaccgataaagctgtagtaaaggaagtcatccgtga tttcgccaaagaatttctgtttagtgaaaaatcagaactgaatgaagataaaatcattacggaggtaaagaaggccggag gtgcaaattacggaacaggatcacgggattga |
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Protein
| Protein ID | pfu_aug2.0_25.1_16739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_25.1_16739.t1 MAKLSDKNSMQEAYSNVRNDTVDMNWLVLGYKDNEIVLEDTGTDFSEFASKFSDDERKYGFLRVVAGDELSKRAKFALIQ WLGHNVSAIKRARMATDKAVVKEVIRDFAKEFLFSEKSELNEDKIITEVKKAGGANYGTGSRD |
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