Gene
| Gene Model ID | pfu_aug2.0_2510.1_02157 |
|---|---|
| Locus | scaffold2510.1 : 16826 ... 22319 : + |
| To GenomeBrowser | scaffold2510.1:16826..22319 |
| Genes list of scaffold | scaffold2510.1 |
| Synonym | pfu_aug1.0_13115.1_61155 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ankyrin repeat and protein kinase domain-containing protein 1-like | GO:0006259 GO:0007126 GO:0022402 GO:0044710 GO:0051276 GO:1902589 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2510.1_02157.t1 | 2 | 1 | Ank_2 | 62 | 99 | 4.8e-21 | 74.9 | 4.6e-08 | 0.00014 | 22.1 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 1 | Ank | 69 | 99 | 1.2e-25 | 87.9 | 3.0e-10 | 8.9e-07 | 28.4 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 1 | Ank_3 | 69 | 98 | 4.8e-16 | 57.2 | 2.6e-06 | 0.0077 | 16.3 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 1 | Ank_5 | 69 | 101 | 4.4e-14 | 52.1 | 8.1e-06 | 0.024 | 14.8 |
| pfu_aug2.0_2510.1_02157.t1 | 2 | 1 | Ank_4 | 70 | 99 | 5.3e-18 | 65.0 | 5.7e-06 | 0.017 | 15.6 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 2 | Ank | 108 | 139 | 1.2e-25 | 87.9 | 1.2e-12 | 3.5e-09 | 35.9 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 2 | Ank_5 | 108 | 149 | 4.4e-14 | 52.1 | 1.6e-11 | 4.7e-08 | 33.0 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 2 | Ank_3 | 109 | 135 | 4.8e-16 | 57.2 | 3.3e-09 | 9.9e-06 | 25.3 |
| pfu_aug2.0_2510.1_02157.t1 | 2 | 2 | Ank_2 | 111 | 170 | 4.8e-21 | 74.9 | 4.5e-17 | 1.3e-13 | 51.0 |
| pfu_aug2.0_2510.1_02157.t1 | 2 | 2 | Ank_4 | 111 | 161 | 5.3e-18 | 65.0 | 8.9e-16 | 2.6e-12 | 46.8 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 3 | Ank | 143 | 170 | 1.2e-25 | 87.9 | 1.4e-07 | 0.00041 | 20.0 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 3 | Ank_3 | 143 | 168 | 4.8e-16 | 57.2 | 7.1e-05 | 0.21 | 11.9 |
| pfu_aug2.0_2510.1_02157.t1 | 3 | 3 | Ank_5 | 144 | 171 | 4.4e-14 | 52.1 | 0.00073 | 2.2 | 8.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2510.1_02157.t1 | gi|524890746|ref|XP_005101916.1| | PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [Aplysia californica] | 4.0e-39 |
| pfu_aug2.0_2510.1_02157.t1 | gi|567880533|ref|XP_006432825.1| | hypothetical protein CICLE_v10002646mg [Citrus clementina] | 3.0e-16 |
| pfu_aug2.0_2510.1_02157.t1 | gi|123440177|ref|XP_001310852.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 3.0e-14 |
| pfu_aug2.0_2510.1_02157.t1 | gi|460386782|ref|XP_004239075.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Solanum lycopersicum] | 5.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_2510.1_02157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2510.1_02157.t1 atgcaaaccattaattattgtagtcaaaagatagctgttgccatgcaagaattaccgtgctctgacgttcacggcgacac gtcaaatctagctaccaccgtttttgcccttatgaaagaaaatgagacgaagcttatcagacaagctaatgcatttgtga agaaaaacaagtcgcgggctcgacaaatttttgaaactgttgtagacggatggacccctctccacgcatgcgcgttaaga ggtagcaaaaagctgttaaaaacaatgcttggtgctggatcagacataaatattcggatgggtcatccagagggactacc tgaccagtgtacgttgctacatatcgcttgtcatcgaggtgatttaaaaatatgtgaacttctattgtcacgtggtgctg acgtcacttcgaaagacggaaattgcagaacgcccgtatattacgccgcaaaacgccgtcacaaaagggtgatcaagtta ctagagaaaaaaggtgcggacgtttcgaacgttgagaaatgggcgccaaatatatcaaatgagtgtgagactcctctccc caccacgtcagggttctgtttcttttggtga |
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Protein
| Protein ID | pfu_aug2.0_2510.1_02157.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2510.1_02157.t1 MQTINYCSQKIAVAMQELPCSDVHGDTSNLATTVFALMKENETKLIRQANAFVKKNKSRARQIFETVVDGWTPLHACALR GSKKLLKTMLGAGSDINIRMGHPEGLPDQCTLLHIACHRGDLKICELLLSRGADVTSKDGNCRTPVYYAAKRRHKRVIKL LEKKGADVSNVEKWAPNISNECETPLPTTSGFCFFW |
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