Gene
| Gene Model ID | pfu_aug2.0_2511.1_05561 |
|---|---|
| Locus | scaffold2511.1 : 246 ... 13121 : + |
| To GenomeBrowser | scaffold2511.1:246..13121 |
| Genes list of scaffold | scaffold2511.1 |
| Synonym | pfu_aug1.0_2468.1_01111 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynactin subunit 6 | GO:0005869 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2511.1_05561.t1 | 4 | 1 | Hexapep | 10 | 42 | 1.7e-06 | 27.2 | 2.0e-06 | 0.015 | 14.8 |
| pfu_aug2.0_2511.1_05561.t1 | 4 | 2 | Hexapep | 48 | 63 | 1.7e-06 | 27.2 | 0.00028 | 2.1 | 7.9 |
| pfu_aug2.0_2511.1_05561.t1 | 4 | 3 | Hexapep | 79 | 106 | 1.7e-06 | 27.2 | 2.2e-05 | 0.16 | 11.4 |
| pfu_aug2.0_2511.1_05561.t1 | 4 | 4 | Hexapep | 95 | 129 | 1.7e-06 | 27.2 | 2.7e-05 | 0.2 | 11.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2511.1_05561.t1 | gi|524879456|ref|XP_005096404.1| | PREDICTED: dynactin subunit 6-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2511.1_05561.t1 | gi|676472491|ref|XP_009059507.1| | hypothetical protein LOTGIDRAFT_192604 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2511.1_05561.t1 | gi|586451252|ref|XP_006834553.1| | PREDICTED: dynactin subunit 6 [Chrysochloris asiatica] | 0.0 |
| pfu_aug2.0_2511.1_05561.t1 | gi|478509192|ref|XP_004428874.1| | PREDICTED: dynactin subunit 6 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_2511.1_05561.t1 | gi|471401631|ref|XP_004383438.1| | PREDICTED: dynactin subunit 6 [Trichechus manatus latirostris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2511.1_05561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05561.t1 atgtcaaccgaggggaaaaagtccagtgtcaaagtggcagctggtgccatgatatgtgaggaatgtgaattgataggaga tataacaataggagcaaaaacgatcattcatcccaaagctcgcatcatagcggaagatggtcctattatcataggcgata ataatatcatagaagaactagttcatattgtaaacaggaatccagataagtcaggtggaacacagcaggttatgattata ggaaacaacaatatatttgaagtaggatcttatattgaatcaacaaaaataggggaccacaatgtggtggaagctaaagg ttatgtagggcgccacctagagatgacatcaggttgtattattggggccaagtgtgaggtcaaaggtcaggagaggttac cagagaacacggtgatttcaggatctgattgtgtaagacgtattgctgcagacagaccccctgcccagggcttgcaaatt gaatttctaatgaaaattttaccaaactaccattatattaggaggttaaaatctggatcatctcagaggaaatga |
|
Protein
| Protein ID | pfu_aug2.0_2511.1_05561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05561.t1 MSTEGKKSSVKVAAGAMICEECELIGDITIGAKTIIHPKARIIAEDGPIIIGDNNIIEELVHIVNRNPDKSGGTQQVMII GNNNIFEVGSYIESTKIGDHNVVEAKGYVGRHLEMTSGCIIGAKCEVKGQERLPENTVISGSDCVRRIAADRPPAQGLQI EFLMKILPNYHYIRRLKSGSSQRK |
|