Gene
| Gene Model ID | pfu_aug2.0_2511.1_05563 |
|---|---|
| Locus | scaffold2511.1 : 51995 ... 56915 : - |
| To GenomeBrowser | scaffold2511.1:51995..56915 |
| Genes list of scaffold | scaffold2511.1 |
| Synonym | pfu_aug1.0_2468.1_01117 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2511.1_05563.t1 | 2 | 1 | Lectin_C | 131 | 241 | 9.0e-12 | 45.5 | 1.2e-15 | 9.0e-12 | 45.5 |
| pfu_aug2.0_2511.1_05563.t1 | 2 | 2 | Lectin_C | 245 | 251 | 9.0e-12 | 45.5 | 1.6 | 12000.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2511.1_05563.t1 | gi|148690016|gb|EDL21963.1| | mCG132033, isoform CRA_a [Mus musculus] | 2.0e-12 |
| pfu_aug2.0_2511.1_05563.t1 | gi|18777739|ref|NP_570975.1| | CD209 antigen-like protein E [Mus musculus] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_2511.1_05563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05563.t1 atgaggggtgctatttcctcattcgttttaaccatattaacattcagccaagtcaggcctgatgttgtgtatcctggtgc cgtaaaatccgcgggtacaaaatcattagtgggcgggggaggatcaaaagctgtcattggcggtggacttggtgtctctc tcggaaaaggcgggggaggaaaggtgataaaatccggaggcggtaacacaataacccatgtcgggggacacgggtacttc ccatctaaagacgaggtcaaatacggaggaggagggtatggaccctcaaaactaatgtacaggaaagttgcaaacgttgg tcctctgcggcagttttgtccctttggttgggaccattatgctggcagctgttactatttcagtagaaacaagctctcat ggttcgacgcagcaatgaagtgcgcctacatgggagggtcgctggccatggtaaaccaagcacatgaaaattcataccta aaactcatgtgcgccaaaaataaaatgtcatatggagtttggtttggactgaataacgttttgtttccaaagtctcattc ttggctctggggatacggaaagaaggcatgtacttggtttgactggtttggtaaaggaccaaaattcaaggatcagaacc ataagtgtgtggcttttaatgaaggttatcattatcaatggtccgttgaaaactgtcgacagaagatgtattacatctgt gaactcaatcctaaaaacccatgtgtgtgcaaatactaa |
|
Protein
| Protein ID | pfu_aug2.0_2511.1_05563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05563.t1 MRGAISSFVLTILTFSQVRPDVVYPGAVKSAGTKSLVGGGGSKAVIGGGLGVSLGKGGGGKVIKSGGGNTITHVGGHGYF PSKDEVKYGGGGYGPSKLMYRKVANVGPLRQFCPFGWDHYAGSCYYFSRNKLSWFDAAMKCAYMGGSLAMVNQAHENSYL KLMCAKNKMSYGVWFGLNNVLFPKSHSWLWGYGKKACTWFDWFGKGPKFKDQNHKCVAFNEGYHYQWSVENCRQKMYYIC ELNPKNPCVCKY |
|