Gene
Gene Model ID | pfu_aug2.0_2528.1_28842 |
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Locus | scaffold2528.1 : 19266 ... 32315 : + |
To GenomeBrowser | scaffold2528.1:19266..32315 |
Genes list of scaffold | scaffold2528.1 |
Synonym | pfu_aug1.0_18.1_14703 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2528.1_28842.t1 | 1 | 1 | LETM1 | 58 | 323 | 1.7e-39 | 135.4 | 4.49817e-43 | 2.2e-39 | 135.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2528.1_28842.t1 | gi|676488908|ref|XP_009064766.1| | hypothetical protein LOTGIDRAFT_236224 [Lottia gigantea] | 0.0 |
pfu_aug2.0_2528.1_28842.t1 | gi|572266831|ref|XP_006611507.1| | PREDICTED: LETM1 domain-containing protein 1-like [Apis dorsata] | 1.99993e-41 |
pfu_aug2.0_2528.1_28842.t1 | gi|383852924|ref|XP_003701975.1| | 4.00001e-41 | |
pfu_aug2.0_2528.1_28842.t1 | gi|380027552|ref|XP_003697486.1| | 7.00005e-41 | |
pfu_aug2.0_2528.1_28842.t1 | gi|524899284|ref|XP_005106079.1| | PREDICTED: LETM1 domain-containing protein 1-like isoform X1 [Aplysia californica] | 4.00001e-40 |
Transcript
Transcript ID | pfu_aug2.0_2528.1_28842.t1 |
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Definition | - |
>pfu_aug2.0_2528.1_28842.t1 atgataacttgcagagtcgtcttggcaagacagactgttcaacaagggaatctgtggataagatgtctgtcacataaaca aaaggacaatattgaaagtcaccctaagaaaaccaagtcatgggtattgaggaaagtatccagatttgtcgagagctcgg agagaatgttagagaaaaaagctccaaaggtgtataagggatatagatacttcaaggatggtgtccaagaattaggacag gacacaaaggcctattacaagataagtaaggagattgaaggtggaaaatccttggatacgttcacttacagagaacttat gttatatagaaagatgcctgatgaacttttcaaagccattcctatacttatcttagctgttataccgtttgggatttatt tgtttgctatagtgtactttttcccacgcacttttctcacatcacatttcttgtctgctgaattacaaagagagatatac cttgacagacataagaagcagcttaaattctatggacctttactgaaggacatggaggcgcagctaaaccccgaaactcg taaaacaaacccgaatgaaaccaaaattatccaaaatattcttcaggagatacatagagggcatgaacccggggtcaaag aaattgttcaatctcgcaaactttttgagtctagtccatatagcattgaaaagttacctatcagacacagaattcattta gctgactgctggggatacaagacttctcagctaggcattcatcgagaggctgttttattacttcatatagatcgtgcaat gataaaaatgggtacaggtgtactatccgataaggaagtaaaggaggcttgttttcatcgaggatttaatccagaaaaat catccagacaagaacaagtcaaatttctagataaatggtgttccttaagtaaacagactaacgaggacagtctatcctta ttactccatggtgctgtcctgttgaattacaacctcccggcaaatcagaaaattttaaaagggaagagctag |
Protein
Protein ID | pfu_aug2.0_2528.1_28842.t1 |
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Definition | - |
>pfu_aug2.0_2528.1_28842.t1 MITCRVVLARQTVQQGNLWIRCLSHKQKDNIESHPKKTKSWVLRKVSRFVESSERMLEKKAPKVYKGYRYFKDGVQELGQ DTKAYYKISKEIEGGKSLDTFTYRELMLYRKMPDELFKAIPILILAVIPFGIYLFAIVYFFPRTFLTSHFLSAELQREIY LDRHKKQLKFYGPLLKDMEAQLNPETRKTNPNETKIIQNILQEIHRGHEPGVKEIVQSRKLFESSPYSIEKLPIRHRIHL ADCWGYKTSQLGIHREAVLLLHIDRAMIKMGTGVLSDKEVKEACFHRGFNPEKSSRQEQVKFLDKWCSLSKQTNEDSLSL LLHGAVLLNYNLPANQKILKGKS |