Gene
| Gene Model ID | pfu_aug2.0_253.1_10505 |
|---|---|
| Locus | scaffold253.1 : 66996 ... 89433 : + |
| To GenomeBrowser | scaffold253.1:66996..89433 |
| Genes list of scaffold | scaffold253.1 |
| Synonym | pfu_aug1.0_419.1_58108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_253.1_10505.t1 | 6 | 1 | WD40 | 434 | 447 | 1.5e-31 | 107.0 | 0.014 | 53.0 | 3.9 |
| pfu_aug2.0_253.1_10505.t1 | 6 | 2 | WD40 | 465 | 496 | 1.5e-31 | 107.0 | 3.6e-10 | 1.3e-06 | 28.0 |
| pfu_aug2.0_253.1_10505.t1 | 6 | 3 | WD40 | 500 | 536 | 1.5e-31 | 107.0 | 4.0e-09 | 1.5e-05 | 24.6 |
| pfu_aug2.0_253.1_10505.t1 | 6 | 4 | WD40 | 540 | 575 | 1.5e-31 | 107.0 | 2.1e-07 | 0.00079 | 19.2 |
| pfu_aug2.0_253.1_10505.t1 | 6 | 5 | WD40 | 581 | 615 | 1.5e-31 | 107.0 | 5.6e-07 | 0.0021 | 17.8 |
| pfu_aug2.0_253.1_10505.t1 | 6 | 6 | WD40 | 629 | 656 | 1.5e-31 | 107.0 | 9.1e-07 | 0.0034 | 17.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_253.1_10505.t1 | gi|676474387|ref|XP_009060131.1| | hypothetical protein LOTGIDRAFT_154169 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_253.1_10505.t1 | gi|585694511|ref|XP_006821837.1| | PREDICTED: F-box/WD repeat-containing protein 10-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_253.1_10505.t1 | gi|260802668|ref|XP_002596214.1| | hypothetical protein BRAFLDRAFT_202877 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_253.1_10505.t1 | gi|390333779|ref|XP_794564.3| | PREDICTED: CMT1A duplicated region transcript 1 protein [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_253.1_10505.t1 | gi|573895517|ref|XP_006635506.1| | PREDICTED: F-box/WD repeat-containing protein 10-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_253.1_10505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10505.t1 atggtggaagtctgtaacaacttcaacaacaacatgtctgtgctcagtagtggagtcttgctgaactctcttgtgccgga acactcaccactggcaaatggaaagatgaaacatcctgggtcagacgtggaagtgttcgagttcaatatcggaaaagctc aaagtctgagatgtgtcagctcagacagggctacaacatgcggaaaatgtgaaagttgtgtattaacgaggcagctcaaa gaggttagagaatggttccccaaaatgggtgatcagtctaaaaaacggttcatgttgggtctgatgcgccgcctacacag tgtggatctcctgaaccaagttgtcagcctccttcagcctttgctcaataaagatttcacatactcccggagtagatctg ccccaagtctggagacagactctgtaacattaagctcagatagggcaatgccggctagagaagtagaatatttcatatca aatacatggacttggtttcagaaagctaattattggactaaggcaaactatgccctggccatgctacaacactgtgatag ttttctactccatgctataggtggcgactacattgaagcatcgtctatagctagtacaaattattcctttaaaagtgaag acagacctgatcttaaccttctgatacgttcctctccacattacggtattcccaaagtggaccctttcaccggcgaggaa ctttacctggacgacgagatagagaatgatgacagtggtgacgagcctgacgtatcaagtaccccgtcagtggaccccgc ctgtatggtggtacccacctcagccaaggcctactcaggggtgtccaaacacatagactttatacgatcattacccgtac atttagcaaagtatatcctcaaattattagacaaaacatccttaaacaacgctctattggtgagcagaaattggcgatcc ctagtccaagaggtacacgaggaagaaaagatcaaccagcttcttacggaagatgtaatgctgatgcagggtgctgctgc ccaaggtgtgaaccatcagtatgccaaggacatagatgtactggtacctaacctgtaccccggtagccgcaccacgatac gcacggacgaggaggtagtcagccccacatatctacaggaaatcaactttaacaatgcttacagtggggtatccacacgg aaagttattatggaggaacgcaatgtctactgtggggcttacaatgtcatggtgcttagtgatcaagtggatcctcatag agtcattcacacaggaggtggagatcttatagctataggatcaaaggatcgtaaagttcgcttcacttccatcgagcctg acaaggtcgacacacccatgccaaacccgattacaggtcatgctgggagtatacggtgctgtcatatactggaggaacaa aggctcatcatcagcggcagctatgatactagtattaggatgtgggatatagatacaggatcctgtaaacggatatttcg aggtcatcgtgacacgattcttacaattactgttgttggtgattatttagggtcaggagctaaagataattcatgcaaag tttttaatctgcacacgggaaagtgtcatagaacattccgacatcgagctccagtatgggcggtggccatgagtaaggaa gtctgtatatctggatgtgaacagggcaaggtcaaagtgtgggacctcaaatctggagatcttataaaggtgctaaatcg tcatcatggtcagataacgtctattaagtttgatcgctggcacatcatcaccggcagtacggatggttacgccctcgtgt ggagctctcagggagatcacgacagatgtcttaacgcactacgtcatccaaagcctgtattatgtttagagtttatgtat ctccgtgtgataactgggtcacaggacggacgtattaggatatggaacatggtcaacagtcagtgctgtcgtataatgag gggaaacagtcagagcacccctatcagatcaattatagcccttggtgatagaattaccctaaacacagacataaatcttc tagtgctaaactttgagccagtagagtgggactacacgttagaaaacgacaaaataccatcatttgtgaagtatgggtgt tatgccgacgctccaatcagacctcagccttacccctacatacgtgctcagagaatgaaacgtgctggagcgacaaatac caaaatcgttcatcacaacaaagttatagagacattaagtgaaccacgtacacctctacagactcagtacagagctgcac agctaccacatagtgctaaaagtctaagcttgaaaagcatggagaatgctcgctttatacagagtgcagggcctgagtca ggttatgaaagcggcccttctcctcgtgctctcccggagtccagacctacatcagagaggtggactgtatcgtcacagaa atcaaaacattcctccatcgctaaaccaccacttccaaaaccaaagccaactacacccaaaactatacccactcacgtta atgtcatgatcactgatccaaaacagaaagaatacgatgatgatgaagatgatgagggaactccacccaccatcatgaaa cgacgtgtatcgtgggcgtttgacactccatatgttcccaagtcaaaagaaatatctctgtcagaaacgaaagccgtact cagatctcaaatgagaatgaaagccgaaaaccaagtgcctcctgactttatatatttgactataaatgcaatacagaatt caatgacatcatcagaaaccatccataacacagagaaaaacatgaaattgttagctgcaagatttgacggactgaccaag agaccttcatcctcacccagcaaaatcgatccaagaaccaggatacctgtagaagaaatgtcgctagataagttacggcc aaaacaagatgatgttgaaactgtatcagaggtgtctgataataaatctgtaaaatctatgaagtccactaaaaccacaa aatcaatgatgtcgcacggtccagatagagaactatacgccactccatgtgaagttaaaccaaccaaaacaaagattaga atgagtctacatccaaagagaattaagacaacggtgccgtcaggacgctctatacgaccgctttctgcctctgtgtcacg gagacaaccaccaccagatcccgaggaaaatataggtagacctgtaacggcaccatcgctacggcggccagacacggcga tatcctcggtaccatccactatagctacagttatgccaggattagtgccccagcagaagaggcaaccagacagactaaca acctctggttatgaatctaaccttgtacctatgaagatgtaccctaaagacatgaaagagaaactcagtgcacttataga gtcaaaaagacggacaaagtcagagaccatattacggtcagccagtgacacggcaattggtaaagttagtaaatataatg acccaatgcgtagtcatgtcaaatttgaattaagaacatacgaacaagaacaggatcatataaagaatgtagaacatcag taccagaagaggctacaggaggaagatgtaatgctagagaaaaagaaaagagcagcatggttagccaaggtcaaagttcg acctaccacggtacacggtgagaaacccgatagttga |
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Protein
| Protein ID | pfu_aug2.0_253.1_10505.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10505.t1 MVEVCNNFNNNMSVLSSGVLLNSLVPEHSPLANGKMKHPGSDVEVFEFNIGKAQSLRCVSSDRATTCGKCESCVLTRQLK EVREWFPKMGDQSKKRFMLGLMRRLHSVDLLNQVVSLLQPLLNKDFTYSRSRSAPSLETDSVTLSSDRAMPAREVEYFIS NTWTWFQKANYWTKANYALAMLQHCDSFLLHAIGGDYIEASSIASTNYSFKSEDRPDLNLLIRSSPHYGIPKVDPFTGEE LYLDDEIENDDSGDEPDVSSTPSVDPACMVVPTSAKAYSGVSKHIDFIRSLPVHLAKYILKLLDKTSLNNALLVSRNWRS LVQEVHEEEKINQLLTEDVMLMQGAAAQGVNHQYAKDIDVLVPNLYPGSRTTIRTDEEVVSPTYLQEINFNNAYSGVSTR KVIMEERNVYCGAYNVMVLSDQVDPHRVIHTGGGDLIAIGSKDRKVRFTSIEPDKVDTPMPNPITGHAGSIRCCHILEEQ RLIISGSYDTSIRMWDIDTGSCKRIFRGHRDTILTITVVGDYLGSGAKDNSCKVFNLHTGKCHRTFRHRAPVWAVAMSKE VCISGCEQGKVKVWDLKSGDLIKVLNRHHGQITSIKFDRWHIITGSTDGYALVWSSQGDHDRCLNALRHPKPVLCLEFMY LRVITGSQDGRIRIWNMVNSQCCRIMRGNSQSTPIRSIIALGDRITLNTDINLLVLNFEPVEWDYTLENDKIPSFVKYGC YADAPIRPQPYPYIRAQRMKRAGATNTKIVHHNKVIETLSEPRTPLQTQYRAAQLPHSAKSLSLKSMENARFIQSAGPES GYESGPSPRALPESRPTSERWTVSSQKSKHSSIAKPPLPKPKPTTPKTIPTHVNVMITDPKQKEYDDDEDDEGTPPTIMK RRVSWAFDTPYVPKSKEISLSETKAVLRSQMRMKAENQVPPDFIYLTINAIQNSMTSSETIHNTEKNMKLLAARFDGLTK RPSSSPSKIDPRTRIPVEEMSLDKLRPKQDDVETVSEVSDNKSVKSMKSTKTTKSMMSHGPDRELYATPCEVKPTKTKIR MSLHPKRIKTTVPSGRSIRPLSASVSRRQPPPDPEENIGRPVTAPSLRRPDTAISSVPSTIATVMPGLVPQQKRQPDRLT TSGYESNLVPMKMYPKDMKEKLSALIESKRRTKSETILRSASDTAIGKVSKYNDPMRSHVKFELRTYEQEQDHIKNVEHQ YQKRLQEEDVMLEKKKRAAWLAKVKVRPTTVHGEKPDS |
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