Gene
| Gene Model ID | pfu_aug2.0_253.1_10507 |
|---|---|
| Locus | scaffold253.1 : 109497 ... 149735 : - |
| To GenomeBrowser | scaffold253.1:109497..149735 |
| Genes list of scaffold | scaffold253.1 |
| Synonym | pfu_aug1.0_14725.1_32473 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha- -mannosylglycoprotein 6-beta-n-acetylglucosaminyltransferase a-like | GO:0006487 GO:0030144 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_253.1_10507.t1 | 1 | 1 | Glyco_transf_18 | 542 | 604 | 5.1e-22 | 77.9 | 1.1e-24 | 1.4e-21 | 76.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_253.1_10507.t1 | gi|676435406|ref|XP_009047546.1| | hypothetical protein LOTGIDRAFT_172419 [Lottia gigantea] | 3.0e-23 |
| pfu_aug2.0_253.1_10507.t1 | gi|524894911|ref|XP_005103945.1| | PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like [Aplysia californica] | 9.0e-23 |
| pfu_aug2.0_253.1_10507.t1 | gi|597787408|ref|XP_007257143.1| | PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like [Astyanax mexicanus] | 4.0e-19 |
| pfu_aug2.0_253.1_10507.t1 | gi|699573433|ref|XP_009870995.1| | PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like, partial [Apaloderma vittatum] | 3.0e-17 |
| pfu_aug2.0_253.1_10507.t1 | gi|697025735|ref|XP_009574660.1| | PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A, partial [Fulmarus glacialis] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_253.1_10507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10507.t1 atgagtgatcctttaccagtagtggaagaagatgagtaccatcgaattattgagcggaatagacacaagattgtgaaaat gatcaacgtcaatgttttcttggatcctttacggacaaagggcattctcagcggattttttctggacattctacaaacaa aaggagaccgtggattggaagtgttcttggagatattggaatatgaacttcctcagctgtttgaagaggtgacaagtaaa acggcaagggaacctccgcaagattacatcaaacatagagagagtgtagtgatgaactgggtttatagactaccagagtt tgccaaagacttacagagagattatgaccataacaaagatctgaggaaaaaactgaaggacatggaggagatattgaagt atgctcaagacaacaacagcttcctggagcaagaaaatgaagaactacgaaagaagcttgacagaatattaattgaaaag aactcaactgaggagaggcttgctgaatgctatagagaaatcaataacttaaaagatcagtcattgaaacatttgacgga gtgtttagagctacaaaaggaaagtcagacttgtagagaaagattaagagatgtaatgctggagaaagacgagatggaaa ggcagaatcatgcacttagaaatgatctgagtaaaaaccacgctgatttgatgattgcaaaaagacagtccatagtttta cctagacagccacctatagtgacgtcaccaaatattgatcggcagttgagtgaaacagagatcagaattaaaattttgga agaaaaactggatgatgaatataagaaccgtgaagacctaagtctgagactacaacaggcaacaaatgaagcagatgact atcagaaccgctatagaaagatgagagaatcccatgaaaaggtgaccaaagagcggaatgcattaatgaatagcttagaa gaaagagaaaaacgtattaatgactattataggatgattattgacctgcaaaatcagaagtcaagggtggaagaggagag aaataatgaacagaagaaactagcagagatgtcagaagagaaattcaaacagtttatagatcaccatagggttgtagatg aactggaagttttgaaatccaaatatgaacaactaaagattcagtataacaggcactcaggtgaatctgacaaaggaaag gatgaatatgagttacaatgtgattcagaaagtagagatcaatttcagtcgtctacgttaccagcctccttcagctctgg tatctctcatcttagtgatacaaacgaatttagccgagttagcgcatttgaaaggcggtattgcagaaagcccaagccac aagaggtttatgataatttttcagatgtaccccatagttcactagacagaagtgcaactttacaacctgagcgtggatcg gatattttctatgttgatgataaaccacaacgacttgatactaaagtatttcaagctgctgcaaaactagagatacgcac tgatccttcttcacaagagtttggtatacaagagactgactcaccgagtgaattaagacctcgaggtccaaggaattaca atgctacacctcccgatcatgtcaaagctaatatcattaagattcttgtccatttaggattattgtcgaagcagtcaggc tggaagtttgctgaaaatcagtttaaaggaggacctttaggagagctggtacagtggagtgaccttataacgaccttgta catcctgggtcatgacctcaccattacaagtgagaccgaacaacttgccaaaccacctccaaaactgacaggattacctg gcaatccagtcaaggaacaaacattcaaaatcaaccttcccatgagactagaactgactggtggtaacgtcatcggtata tacgttcaaaagtcctccgagtcgagacttaatcctggagacgaaattctgtctgtatctttgatcaatgagagtaatta ccagatcatctcaacgcaatgtttgaagcactgcacgctcgaggaagcattatcagcgtttgatttgaactcaactccag ggtcatctcagatagaggtcaaagttcgcaaagtgtctgctgcagaatctgaagctataagagtttggaaggaaaagcat aaaagcaatggagattatttctttataagattcaacatttcccatgaaagtccagccgtaaattctgatgtactgagtat taaaaggggtgatgtaatgaaagtgaccaatacaaacatacagaaaggtcattggcaggtcactttgtgggatcatatca agggcaaatggacaaaggagggaatcataccaaaagacatgagaaagtttaaagtacccactacacaagtgaatgctacc aaaaagaaagcattcagaataagatttgcagcatttgagcgggtactgccaacaaaagttcagaccaaacttcctgtgat actccacggtaacaaggacatcgtgcgacgactccagatgatgatggtggatgcatcaagtgattactgtatatgtaact cggaggaagcatgtaagaaaatttcagagacaatgaaaatgtgtcagcagagggataaacatgtactactaaatgagctg ttcctgaagcgtagatcacaactatgggtggcgtatattgttgtttgtctcaatacggagagagcgtcaccaagtgctat acataaaatatttggagaggacattcatcagagtatggacatatataaagaattaccacgagaagatattgtttatgaga ctataacattaccccatccagagatagcagacaagagagagaacctgctaaagcttgtgtttgaggccgttaagagagga caggaacgtgtttactggagtagtgacagccagctggattccgctacagttgacagttacaaacagttcctaagtgatga ttcaattaacagaatgacgggggacgataaacgttatagaagatcgctgtctctacctaacaactgtttacaatag |
|
Protein
| Protein ID | pfu_aug2.0_253.1_10507.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10507.t1 MSDPLPVVEEDEYHRIIERNRHKIVKMINVNVFLDPLRTKGILSGFFLDILQTKGDRGLEVFLEILEYELPQLFEEVTSK TAREPPQDYIKHRESVVMNWVYRLPEFAKDLQRDYDHNKDLRKKLKDMEEILKYAQDNNSFLEQENEELRKKLDRILIEK NSTEERLAECYREINNLKDQSLKHLTECLELQKESQTCRERLRDVMLEKDEMERQNHALRNDLSKNHADLMIAKRQSIVL PRQPPIVTSPNIDRQLSETEIRIKILEEKLDDEYKNREDLSLRLQQATNEADDYQNRYRKMRESHEKVTKERNALMNSLE EREKRINDYYRMIIDLQNQKSRVEEERNNEQKKLAEMSEEKFKQFIDHHRVVDELEVLKSKYEQLKIQYNRHSGESDKGK DEYELQCDSESRDQFQSSTLPASFSSGISHLSDTNEFSRVSAFERRYCRKPKPQEVYDNFSDVPHSSLDRSATLQPERGS DIFYVDDKPQRLDTKVFQAAAKLEIRTDPSSQEFGIQETDSPSELRPRGPRNYNATPPDHVKANIIKILVHLGLLSKQSG WKFAENQFKGGPLGELVQWSDLITTLYILGHDLTITSETEQLAKPPPKLTGLPGNPVKEQTFKINLPMRLELTGGNVIGI YVQKSSESRLNPGDEILSVSLINESNYQIISTQCLKHCTLEEALSAFDLNSTPGSSQIEVKVRKVSAAESEAIRVWKEKH KSNGDYFFIRFNISHESPAVNSDVLSIKRGDVMKVTNTNIQKGHWQVTLWDHIKGKWTKEGIIPKDMRKFKVPTTQVNAT KKKAFRIRFAAFERVLPTKVQTKLPVILHGNKDIVRRLQMMMVDASSDYCICNSEEACKKISETMKMCQQRDKHVLLNEL FLKRRSQLWVAYIVVCLNTERASPSAIHKIFGEDIHQSMDIYKELPREDIVYETITLPHPEIADKRENLLKLVFEAVKRG QERVYWSSDSQLDSATVDSYKQFLSDDSINRMTGDDKRYRRSLSLPNNCLQ |
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