Gene
| Gene Model ID | pfu_aug2.0_253.1_10508 |
|---|---|
| Locus | scaffold253.1 : 153896 ... 156354 : + |
| To GenomeBrowser | scaffold253.1:153896..156354 |
| Genes list of scaffold | scaffold253.1 |
| Synonym | pfu_aug1.0_2926.1_51836 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_253.1_10508.t1 | 1 | 1 | DUF2373 | 231 | 295 | 8.4e-22 | 76.4 | 2.6e-25 | 1.9e-21 | 75.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_253.1_10508.t1 | gi|226443290|ref|NP_001140101.1| | CG050 protein [Salmo salar] | 1.0e-25 |
| pfu_aug2.0_253.1_10508.t1 | gi|156404616|ref|XP_001640503.1| | predicted protein [Nematostella vectensis] | 2.0e-24 |
| pfu_aug2.0_253.1_10508.t1 | gi|612037136|ref|XP_007498423.1| | PREDICTED: uncharacterized protein C7orf50 homolog, partial [Monodelphis domestica] | 3.0e-23 |
| pfu_aug2.0_253.1_10508.t1 | gi|733910612|ref|XP_010717967.1| | PREDICTED: uncharacterized protein C7orf50 homolog [Meleagris gallopavo] | 4.0e-23 |
| pfu_aug2.0_253.1_10508.t1 | gi|488597469|ref|XP_004483895.1| | PREDICTED: uncharacterized protein C7orf50 homolog [Dasypus novemcinctus] | 4.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_253.1_10508.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10508.t1 atgaagagaaagataactgattgtgataaaaaggagggagatggacagatggcggggaagggaaagttaaaacatataca tacacctaaatatgaaaatatgatggatggggttggttcagattacaaagaaaagaagaaaaaatatgatgaatcgtcac caaagataaacacagaaactgtaaatgtggataaaaagcatgagactgaacaatctgataaaaagcaaataaatgaaaag agaaaaaagatgaaaagaaaaaggaataaggagattgctgaaaagaatgattctggagaaggcattgctgaatctggtac aagttatacatgtgaaagtccaactaccaaaaacaacaaaagaaagcatattctacacgaaaacactgatctacatgaag aaaaaccttcaaagaagaagaagaaaaagaaaattaaggaattggaactcggtgactgtataaaacattttgtaggcgat tcagaaaagaaaaaggatccagaagaaagtaaaaatagtgatggacaattggcaaaggaaggttctgatgctgaaattaa gacttctaaagtcaaaagcaataaagcaaaacgaaaagagaaaaagaaaaaaagaaggaggaagaaaatagcaaaggaag aagaagatgaagaggatgattctaaggaaggaacagcacaaactgccgcactggaatatctgaggttatgggcaaacaac aaaaaagagtggaaatttcaaaaagtccgccaagtttggctccttaacaatctattcagtaatgagaaggttcaagacaa agattttgctatccttttgtcatatctagaaggactgaaaggaaagtcaaggcaaacaactctccaaatggcagagaaaa ttatggaaccagtagatagtgattctgaagattcagaagaagttgtagatgcagtaaaacaggacagagcaaaacaaatc attcagatcctttcttaa |
|
Protein
| Protein ID | pfu_aug2.0_253.1_10508.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10508.t1 MKRKITDCDKKEGDGQMAGKGKLKHIHTPKYENMMDGVGSDYKEKKKKYDESSPKINTETVNVDKKHETEQSDKKQINEK RKKMKRKRNKEIAEKNDSGEGIAESGTSYTCESPTTKNNKRKHILHENTDLHEEKPSKKKKKKKIKELELGDCIKHFVGD SEKKKDPEESKNSDGQLAKEGSDAEIKTSKVKSNKAKRKEKKKKRRRKKIAKEEEDEEDDSKEGTAQTAALEYLRLWANN KKEWKFQKVRQVWLLNNLFSNEKVQDKDFAILLSYLEGLKGKSRQTTLQMAEKIMEPVDSDSEDSEEVVDAVKQDRAKQI IQILS |
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