Gene
| Gene Model ID | pfu_aug2.0_253.1_10521 |
|---|---|
| Locus | scaffold253.1 : 352722 ... 362671 : + |
| To GenomeBrowser | scaffold253.1:352722..362671 |
| Genes list of scaffold | scaffold253.1 |
| Synonym | pfu_aug1.0_30419.1_47976 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| minor histocompatibility antigen h13-like isoform x2 | GO:0004190 GO:0006508 GO:0016021 GO:0043523 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_253.1_10521.t1 | 1 | 1 | Peptidase_A22B | 68 | 320 | 0.0 | 262.2 | 0.0 | 0.0 | 261.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_253.1_10521.t1 | gi|676420837|ref|XP_009043734.1| | hypothetical protein LOTGIDRAFT_102125 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_253.1_10521.t1 | gi|524883554|ref|XP_005098404.1| | PREDICTED: minor histocompatibility antigen H13-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_253.1_10521.t1 | gi|551506978|ref|XP_005805020.1| | PREDICTED: minor histocompatibility antigen H13-like isoform X2 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_253.1_10521.t1 | gi|551506982|ref|XP_005805022.1| | PREDICTED: minor histocompatibility antigen H13-like isoform X4 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_253.1_10521.t1 | gi|551506976|ref|XP_005805019.1| | PREDICTED: minor histocompatibility antigen H13-like isoform X1 [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_253.1_10521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10521.t1 atggacaacatgacagaaagcggtaacgtgcctgttgtaaatgcaaccggcaatgaaacggctggaaatgccacggctaa aattccagctacaccagaaggaatggccattgcatacggaagcttggtcattatggctatcctgccgattttgtttggag cattcagatccgtgaaatatcaccaggatcaaaaggactctggagaaaaaccagagactatgtccagtaaagatgctgca atgtttccccttattgccagtggtacactttttggaatataccttgtatttcagatcttctctaaagaacatataaactt gctgctaacagtgtatttcttctttctcggagtgttagctttggcacatattgcaagtccatactttgccaagctgattc caaactcatttcctaacatggagtatcatttgatatttactcaaggaaagaaagaaaagaaagaagagttgatgaactat gagtttgacagaaaagaccttgtatgtttactgtgttgtggagctgttggtgtgtggtatctagtcaagaagcattggat agccaacaatctgtttggtttagcctttgctgtaaatggtgtggaaattctgtctctgaatcgagtcagcacaggatgta tcctgctgggtggactgttcatctacgacatcttctgggtgtttggcaccaacgtcatggtaacagtagccaagtccttc gaagcaccaattaaattggtgttcccacaagatttactagagaagggtctggctgctaacaactttgctatgttaggtct tggtgatatagtcatacctggaatcttcatagctttactgctcagatttgatattagtctaaaaaagaacagcaagacat atttttacgccagctttatagcttatttcctaggattgatgatgaccattgtagtaatgcatttcttcaaacatgcacag attcatctgtatcattcatcagaaaacaaataa |
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Protein
| Protein ID | pfu_aug2.0_253.1_10521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_253.1_10521.t1 MDNMTESGNVPVVNATGNETAGNATAKIPATPEGMAIAYGSLVIMAILPILFGAFRSVKYHQDQKDSGEKPETMSSKDAA MFPLIASGTLFGIYLVFQIFSKEHINLLLTVYFFFLGVLALAHIASPYFAKLIPNSFPNMEYHLIFTQGKKEKKEELMNY EFDRKDLVCLLCCGAVGVWYLVKKHWIANNLFGLAFAVNGVEILSLNRVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSF EAPIKLVFPQDLLEKGLAANNFAMLGLGDIVIPGIFIALLLRFDISLKKNSKTYFYASFIAYFLGLMMTIVVMHFFKHAQ IHLYHSSENK |
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