Gene
| Gene Model ID | pfu_aug2.0_2532.1_08901 |
|---|---|
| Locus | scaffold2532.1 : 3798 ... 5395 : - |
| To GenomeBrowser | scaffold2532.1:3798..5395 |
| Genes list of scaffold | scaffold2532.1 |
| Synonym | pfu_aug1.0_928.1_51124 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2532.1_08901.t1 | 1 | 1 | zf-B_box | 13 | 49 | 1.2e-11 | 44.2 | 6.8e-15 | 2.5e-11 | 43.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2532.1_08901.t1 | gi|642918936|ref|XP_008191664.1| | PREDICTED: B-box type zinc finger protein ncl-1-like isoform X2 [Tribolium castaneum] | 3.0e-07 |
| pfu_aug2.0_2532.1_08901.t1 | gi|170575166|ref|XP_001893127.1| | B-box type zinc-finger protein ncl-1 [Brugia malayi] | 6.0e-07 |
| pfu_aug2.0_2532.1_08901.t1 | gi|642918930|ref|XP_008191661.1| | PREDICTED: B-box type zinc finger protein ncl-1-like isoform X1 [Tribolium castaneum] | 1.0e-06 |
| pfu_aug2.0_2532.1_08901.t1 | gi|642918938|ref|XP_008191665.1| | PREDICTED: B-box type zinc finger protein ncl-1-like isoform X3 [Tribolium castaneum] | 2.0e-06 |
| pfu_aug2.0_2532.1_08901.t1 | gi|642918940|ref|XP_008191666.1| | PREDICTED: B-box type zinc finger protein ncl-1-like isoform X4 [Tribolium castaneum] | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2532.1_08901.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2532.1_08901.t1 atggcaactagtttgtacaaggctcagtttgctcttagaacttgtaatgaacacgataagaaagagcttaattactactg taagacttgtaagaaaacaatttgtacgaactgtgtgaaatcagaacataatagtcatgactgggaattaatatcggaat acacgaaagagagacgtcggcaactccccaatgaatgcggtgacctacaaaataaagaattaatggatttgcgacggaaa attgaaaattatgaaacaaaacttgaacaaaatcagaaggagtcggatgagaatgagagtttgcttgtgagcgaacaaca aaggattatcaatggcattaaccgaatgttcaaagagaagatgaagaaaagcaaagagtattccgatgacagacagatga ttttagaaaaggagcgagatgaactgacgaagaaacttggctacttacaaatgatgacacggtcattgaaaacggacttc tcaacattctctgaccatgacattattgaaatggaagaacaattgagaaacgaattggaaacgactgtggaatttgaccc cgaaaagcacgtaagttgtagtgtgtttctgaaaggagatcgtaagatgatctcaagcaatcttggaatattacacactc tttcgttggatgaattagcctcatttagtgtctccacatcatgtccagtaatcatagaaccacttgaatcaggtacggct gcttggattggttgtaacgaagaggaacctttcaattttatttcggacagtgggaaatcgttgaagacgcgttcacattc tggtattgatttggcagtatcgtctgatggtaaatttatttgtcttctgacaaaatcaggagtgaagatcttggatgaca aagaagtcgtcaaaaacgaaattgacctcaaccctctccaagcgatgagtatagctttaacgacagaaggagacatatta gtgtctctcactgatggtggtgatctttatgacccggacactaacagcaaaagacttgtacgtcacatgatgaagaacgg caaggtgctccatacatatgaattcaaagacgaaggcaaggaaagactgttcaagtgtccctggaaagttgctgaaaata aaaacactgacatatgtgttgtaaataagtcgggttcagccatggccgaggtaattgtacttaccagagaaggtaaatta aagttctgctttcaaggtaccgatccatttgatcccgtggatgtggaatgtgattccaaatgtcgtcttcttattgcgga tatggcttcaaattcattgattgttttgaacagtgaaggtattcaccttgcactacttcacacattcaaagaggtattat gtgcaatatcaatgaaaaatgacaagttgtggtgtgcatttttgggaggatcaatcaaagtttacaactacaaataa |
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Protein
| Protein ID | pfu_aug2.0_2532.1_08901.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2532.1_08901.t1 MATSLYKAQFALRTCNEHDKKELNYYCKTCKKTICTNCVKSEHNSHDWELISEYTKERRRQLPNECGDLQNKELMDLRRK IENYETKLEQNQKESDENESLLVSEQQRIINGINRMFKEKMKKSKEYSDDRQMILEKERDELTKKLGYLQMMTRSLKTDF STFSDHDIIEMEEQLRNELETTVEFDPEKHVSCSVFLKGDRKMISSNLGILHTLSLDELASFSVSTSCPVIIEPLESGTA AWIGCNEEEPFNFISDSGKSLKTRSHSGIDLAVSSDGKFICLLTKSGVKILDDKEVVKNEIDLNPLQAMSIALTTEGDIL VSLTDGGDLYDPDTNSKRLVRHMMKNGKVLHTYEFKDEGKERLFKCPWKVAENKNTDICVVNKSGSAMAEVIVLTREGKL KFCFQGTDPFDPVDVECDSKCRLLIADMASNSLIVLNSEGIHLALLHTFKEVLCAISMKNDKLWCAFLGGSIKVYNYK |
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