Gene
| Gene Model ID | pfu_aug2.0_2532.1_08903 |
|---|---|
| Locus | scaffold2532.1 : 23632 ... 30775 : - |
| To GenomeBrowser | scaffold2532.1:23632..30775 |
| Genes list of scaffold | scaffold2532.1 |
| Synonym | pfu_aug1.0_2454.1_37276 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional adapter 3 | GO:0001932 GO:0003700 GO:0004402 GO:0005671 GO:0006357 GO:0007067 GO:0016922 GO:0019904 GO:0030374 GO:0030520 GO:0030914 GO:0031063 GO:0031647 GO:0033276 GO:0043966 GO:0045893 GO:0072686 GO:0090043 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2532.1_08903.t1 | 1 | 1 | Ada3 | 50 | 169 | 1.8e-24 | 85.9 | 4.7e-28 | 2.3e-24 | 85.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2532.1_08903.t1 | gi|676426351|ref|XP_009044596.1| | hypothetical protein LOTGIDRAFT_207498 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2532.1_08903.t1 | gi|524892051|ref|XP_005102557.1| | PREDICTED: transcriptional adapter 3-B-like [Aplysia californica] | 2.99878e-43 |
| pfu_aug2.0_2532.1_08903.t1 | gi|556994641|ref|XP_006001269.1| | PREDICTED: transcriptional adapter 3 [Latimeria chalumnae] | 9.99995e-41 |
| pfu_aug2.0_2532.1_08903.t1 | gi|12834056|dbj|BAB22769.1| | unnamed protein product [Mus musculus] | 2.0e-39 |
| pfu_aug2.0_2532.1_08903.t1 | gi|723125622|ref|XP_010295135.1| | PREDICTED: transcriptional adapter 3-like, partial [Phaethon lepturus] | 3.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_2532.1_08903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2532.1_08903.t1 atgtttaagttggggtcattcgaatttatcatgtttatagacgacaatctagggtctatttgtaaaggatttataaaaga atcagcagatgaggctcccgccatttctcccagagctttggccaaagagttaaacatagggaatcctgcacatctggaaa aacgcatcagacgagagctagaagaacaaggaatcctagagagtgaagataaagtggaagataaccctgatgatgaagtt ctaacagagttacgacaaaagcagcaggagttacgggccttgtctcaacataatgtttccgtcatcaaaaccctgatggg gaaggcaaaggaagaaataaagaagcaagatctgaagaaaaaattagcgacagcagatgccgaggttttagaggcataca gaaagatacaggtagcccgacagaagaagaaaacgccaaccaagaaagaaagggatgcagcatggaaggcgctgaaagag agagaaagtatcgttaaacttatagagggaaaactgaagtga |
|
Protein
| Protein ID | pfu_aug2.0_2532.1_08903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2532.1_08903.t1 MFKLGSFEFIMFIDDNLGSICKGFIKESADEAPAISPRALAKELNIGNPAHLEKRIRRELEEQGILESEDKVEDNPDDEV LTELRQKQQELRALSQHNVSVIKTLMGKAKEEIKKQDLKKKLATADAEVLEAYRKIQVARQKKKTPTKKERDAAWKALKE RESIVKLIEGKLK |
|