Gene
| Gene Model ID | pfu_aug2.0_254.1_13883 |
|---|---|
| Locus | scaffold254.1 : 216201 ... 233749 : - |
| To GenomeBrowser | scaffold254.1:216201..233749 |
| Genes list of scaffold | scaffold254.1 |
| Synonym | pfu_aug1.0_22766.1_33292 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_254.1_13883.t1 | 7 | 1 | Ank_5 | 34 | 61 | 3.7e-38 | 128.6 | 0.00022 | 0.42 | 10.9 |
| pfu_aug2.0_254.1_13883.t1 | 4 | 1 | Ank_2 | 35 | 133 | 0.0 | 164.4 | 1.0e-21 | 1.9e-18 | 66.5 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 1 | Ank_4 | 36 | 92 | 1.8e-39 | 133.3 | 7.1e-09 | 1.3e-05 | 25.5 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 1 | Ank | 37 | 59 | 0.0 | 172.4 | 1.6e-05 | 0.03 | 14.1 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 1 | Ank_3 | 37 | 54 | 3.9e-35 | 116.3 | 0.0084 | 16.0 | 6.1 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 2 | Ank_4 | 72 | 125 | 1.8e-39 | 133.3 | 1.8e-12 | 3.3e-09 | 37.0 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 2 | Ank_3 | 72 | 100 | 3.9e-35 | 116.3 | 2.6e-08 | 4.7e-05 | 23.2 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 2 | Ank_5 | 73 | 103 | 3.7e-38 | 128.6 | 1.2e-07 | 0.00021 | 21.3 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 2 | Ank | 74 | 102 | 0.0 | 172.4 | 3.5e-11 | 6.6e-08 | 31.9 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 3 | Ank_5 | 91 | 135 | 3.7e-38 | 128.6 | 1.4e-10 | 2.5e-07 | 30.7 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 3 | Ank | 107 | 135 | 0.0 | 172.4 | 7.9e-08 | 0.00015 | 21.4 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 3 | Ank_3 | 107 | 132 | 3.9e-35 | 116.3 | 3.8e-06 | 0.007 | 16.4 |
| pfu_aug2.0_254.1_13883.t1 | 4 | 2 | Ank_2 | 109 | 204 | 0.0 | 164.4 | 1.1e-21 | 2.0e-18 | 66.4 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 4 | Ank_5 | 148 | 191 | 3.7e-38 | 128.6 | 3.5e-13 | 6.4e-10 | 38.9 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 4 | Ank | 151 | 181 | 0.0 | 172.4 | 2.8e-13 | 5.3e-10 | 38.6 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 3 | Ank_4 | 151 | 196 | 1.8e-39 | 133.3 | 5.0e-12 | 9.3e-09 | 35.5 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 4 | Ank_3 | 151 | 179 | 3.9e-35 | 116.3 | 9.4e-09 | 1.7e-05 | 24.5 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 5 | Ank | 183 | 200 | 0.0 | 172.4 | 0.1 | 190.0 | 2.1 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 5 | Ank_3 | 183 | 195 | 3.9e-35 | 116.3 | 0.16 | 290.0 | 2.2 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 5 | Ank_5 | 220 | 241 | 3.7e-38 | 128.6 | 0.18 | 330.0 | 1.7 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 6 | Ank | 221 | 251 | 0.0 | 172.4 | 1.0e-09 | 1.9e-06 | 27.3 |
| pfu_aug2.0_254.1_13883.t1 | 4 | 3 | Ank_2 | 221 | 284 | 0.0 | 164.4 | 8.2e-14 | 1.5e-10 | 41.2 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 6 | Ank_3 | 221 | 249 | 3.9e-35 | 116.3 | 4.3e-07 | 0.00079 | 19.4 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 4 | Ank_4 | 222 | 274 | 1.8e-39 | 133.3 | 1.5e-09 | 2.8e-06 | 27.6 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 6 | Ank_5 | 240 | 298 | 3.7e-38 | 128.6 | 1.7e-09 | 3.1e-06 | 27.2 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 7 | Ank | 254 | 284 | 0.0 | 172.4 | 2.4e-07 | 0.00044 | 19.9 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 7 | Ank_3 | 254 | 286 | 3.9e-35 | 116.3 | 5.0e-06 | 0.0092 | 16.1 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 5 | Ank_4 | 269 | 304 | 1.8e-39 | 133.3 | 9.9e-05 | 0.18 | 12.3 |
| pfu_aug2.0_254.1_13883.t1 | 4 | 4 | Ank_2 | 270 | 337 | 0.0 | 164.4 | 1.9e-06 | 0.0035 | 17.6 |
| pfu_aug2.0_254.1_13883.t1 | 7 | 7 | Ank_5 | 276 | 337 | 3.7e-38 | 128.6 | 2.8e-05 | 0.051 | 13.8 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 8 | Ank | 292 | 328 | 0.0 | 172.4 | 9.1e-07 | 0.0017 | 18.0 |
| pfu_aug2.0_254.1_13883.t1 | 8 | 8 | Ank_3 | 292 | 322 | 3.9e-35 | 116.3 | 0.00076 | 1.4 | 9.3 |
| pfu_aug2.0_254.1_13883.t1 | 6 | 6 | Ank_4 | 309 | 337 | 1.8e-39 | 133.3 | 0.0011 | 2.1 | 8.9 |
| pfu_aug2.0_254.1_13883.t1 | 1 | 1 | SOCS_box | 426 | 465 | 7.9e-16 | 57.6 | 9.3e-19 | 1.7e-15 | 56.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_254.1_13883.t1 | gi|260828315|ref|XP_002609109.1| | hypothetical protein BRAFLDRAFT_126136 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_254.1_13883.t1 | gi|585723633|ref|XP_006813678.1| | PREDICTED: ankyrin-3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_254.1_13883.t1 | gi|72005593|ref|XP_783942.1| | PREDICTED: ankyrin-1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_254.1_13883.t1 | gi|119720190|ref|YP_920685.1| | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_254.1_13883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_254.1_13883.t1 atggagtccgaagaaagactgccagtttctctgatcaaaaaacataaaaatacctgtcagataaaagagttggggctcga gaagactctcgagaaggagcttgtagatgctgcaaagcgaggagatttttccgtggtaaaggaactattagaattcggaa tatgcccagatgcaaaggaatacaacaagtgcttgttctatgagtcaaagaactacacaactcccttacaaatagcagca acaaatgggtcgtcagacattgtcaactttctcattgaatacggagcttctgttaatgcaagtgatagatttgatgtgag tgccttgcacatggcagcagagaatggaaatctgagctgtttgtcccaactgttggaggcagaagcaaactgtaacgtag gaaccaaatactccaaacacggatcatacacagcatttccgcacccaggaggaaccactcccttacatctagcggcatcc aacaatcatgtagactgtgtgacagagctgatatggcacggagctgattacaatgccgtagacgagtatggacgtacaag tctatatatagctgcacagaaagccttagagcaatgtgtacatgcacatctaaggaacgcaatatggaaagacattctgt ctttgccggccaaagagacaggagatacacctcttcatgagtgtgtaaagaatgggatgttgacatgtatccatgcttta ctgaactgtgggtcggatgtcaatcataaaaacctggctggattctctcccctccatatggcggtacgtgctggacagac cttctccatggatatcctcagggaactggtcaccaatggatacaatactgatgttaatataccagaatctcttggtttta cacctttacactatgtgtgttttcatgagaacaacatgcaggaaaggcgtcctgaagcagcggcacttctcatagcacac ggtgctaagtacacaatccagaatagacagggagataatgttctccaatatgagctgagaacaaacactagagacatgac aattctgtatgcaatcactaaaagtgtggctaccttgccatcagtggaatctcttggcattgcacctccatctaattctg aattgttactgtcccaagcacagaacttcctggcacaaggtcgtagttttcagaatgctcaggaccgcaatgctttccag agaagcttgttcaaatttatcaaaagtgacgtgcagtatcacaaaatgatgtggtacaaagaacttattaaaggacctag atctttacagcattattgccgatgtgttgtcagagatgctctcggggtccagagacttggtaagattaatacactgcctc tacccacaacactgaaggaatacttacagctgcagttagaggaagatccttgtgtgtttcctgagtcatcggaggagcag ccgtag |
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Protein
| Protein ID | pfu_aug2.0_254.1_13883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_254.1_13883.t1 MESEERLPVSLIKKHKNTCQIKELGLEKTLEKELVDAAKRGDFSVVKELLEFGICPDAKEYNKCLFYESKNYTTPLQIAA TNGSSDIVNFLIEYGASVNASDRFDVSALHMAAENGNLSCLSQLLEAEANCNVGTKYSKHGSYTAFPHPGGTTPLHLAAS NNHVDCVTELIWHGADYNAVDEYGRTSLYIAAQKALEQCVHAHLRNAIWKDILSLPAKETGDTPLHECVKNGMLTCIHAL LNCGSDVNHKNLAGFSPLHMAVRAGQTFSMDILRELVTNGYNTDVNIPESLGFTPLHYVCFHENNMQERRPEAAALLIAH GAKYTIQNRQGDNVLQYELRTNTRDMTILYAITKSVATLPSVESLGIAPPSNSELLLSQAQNFLAQGRSFQNAQDRNAFQ RSLFKFIKSDVQYHKMMWYKELIKGPRSLQHYCRCVVRDALGVQRLGKINTLPLPTTLKEYLQLQLEEDPCVFPESSEEQ P |
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