Gene
| Gene Model ID | pfu_aug2.0_254.1_13885 |
|---|---|
| Locus | scaffold254.1 : 267257 ... 307009 : - |
| To GenomeBrowser | scaffold254.1:267257..307009 |
| Genes list of scaffold | scaffold254.1 |
| Synonym | pfu_aug1.0_239.1_22099 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable domain-containing histone demethylation protein 2c | GO:0008168 GO:0032259 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_254.1_13885.t1 | 3 | 1 | JmjC | 917 | 938 | 3.8e-11 | 43.2 | 2.6 | 9700.0 | -3.2 |
| pfu_aug2.0_254.1_13885.t1 | 3 | 2 | JmjC | 1948 | 1985 | 3.8e-11 | 43.2 | 1.9 | 6900.0 | -2.8 |
| pfu_aug2.0_254.1_13885.t1 | 3 | 3 | JmjC | 2412 | 2503 | 3.8e-11 | 43.2 | 1.6e-14 | 6.1e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_254.1_13885.t1 | gi|597059606|gb|AHN05299.1| | 0.0 | |
| pfu_aug2.0_254.1_13885.t1 | gi|524868697|ref|XP_005091148.1| | PREDICTED: probable JmjC domain-containing histone demethylation protein 2C-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_254.1_13885.t1 | gi|524868693|ref|XP_005091146.1| | PREDICTED: probable JmjC domain-containing histone demethylation protein 2C-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_254.1_13885.t1 | gi|524868695|ref|XP_005091147.1| | PREDICTED: probable JmjC domain-containing histone demethylation protein 2C-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_254.1_13885.t1 | gi|642912265|ref|XP_008200629.1| | PREDICTED: probable JmjC domain-containing histone demethylation protein 2C [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_254.1_13885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_254.1_13885.t1 atgaaaaaatcacctgagaaaattaagactcaacatgctaaaaacctggaagtcagcacaaaatgtccgatttctaacga gttaaagaagatcctgacgacaatctcaacagcactcacaatagagcacaaaattaaacatcgacggacccctagcaagc tagagaatttccgatcaatcgttgacaaagttggtctcagtggtatcaagaaacgtgctatagaattcctagaagatagc cagttagcatttgtggaagacagaagtctcaagtgccacgaggagggtgaggaggtgagccaccccactgtcgttgaccg gcctgctgtgggactagccatcaaggcgtggttagactaccaggacgggcagaagctgttgctgaccacacccactatct tggtggggtaccgtctggaggtataccgggctgagggcactacacagtggtacacggctgttatacagggctataaccat actacaaagaccttggtagtaacagacgacaccgtacttgaggaacacaatgaagaccccgcccttattcagatgcgcct gctcgatgacggagttgttgatttcatacttcgcggagtggaaattggaataggggcaagaaggacccgccaaaccaaca aggataaggaccaagttaatgcggtgaggaattcgactcagcaacaaaactcgacttcaaagccgttaccccggaacgca ggtaccaaggcgaaacaaaaggaggttcccgtctcggtaccagccctaccccaggagtcagaaaaagaaaaacaacagca gaagtcaaaaccagcaagagaccgaaagagaaagcccaatgaatcgcaaggcgagagtgtgtcctcagcaaacacaaaac gcacgaaagccgtagacaataaaaaagctcaagtcttagacgagaaggcagactctccgaaagtcagacagacagacaaa agtgagagtgaaaaaagtgaaaaacgaaccactccggtcaaagacttggatacgcgtctgacgcgagataaattgaaaac catcacacagacacatgggaataaaaaagatacaggtaacaaagacaatcatagaatagacaaaagtgtgaaaccctcca gtagaaaaggctcacctttactcaggaacaagactagggaaagtgataaatcgaatgacgtatgttataatcagactgaa agtgatacagacaaaggtgtagtctcagaaaatgagaatttagccaatagtgtcactgaggaaaagtgtagtggtaacga cgaattagattccaaagtcaaggggcaagaatctgataatgactcaaaaaaggaactgtgcgacacagtgataagtaaag atgtgaccgagaaaactagctgtgataaaattaagtctagccagaaatcgtcgtcagagtgtagtgaaaccgaaaccaaa gtctcgtctgacaatagtgaggtcacagacacaacagacgataatatgcactatatgaaacaacgtttgttgaacagcag cacttcctctgataaaaatccagcgccatcattggcagcaaacattgatgttaatcgttctgtcacagaacaaatagcaa aacttacaaggtcggaaaattcttcatcgtctcaagccgaggaagacaagtcaacagcttcaacttcaaagtccgtatca cccaaaacttcatctcactacgaaaatcaacttgatcataaagattataggaaccataattcttacgatgttaatgctct cggaagcttatcaagtacagtcaattcacacgcagaagatcacttccgttctagttcccgagcaagtgatcattcaaact cagggtgtagtgctgacgagagaagaccgggttctcgtgtagaggatataagagtgtcgagtaaaaacagtcctgccacg agccctttagtgatagacaaagcagaaccggtacatccctatagggaccccgaactcatgaaaaagaacactgttcacag taacgtgcatggcatgttgggagctcagaaatatccaaatgttccgactccgataccgtcggcgtcgccggtcacgctgc cgtcgacaacatcgtatccttcacatccgattgcctcgcgttctcatgtgcttccatcgatgcattatccacccacactt ccgtctgccctgagtggagcggcggccctcagccagttgggcctctcgcccgggctgagccagctggatcccacatctct ggcagcactacaacagcaacaacaactggctgcaatgcagtacaatttgttattagctagaagttatccgtctccggcaa atctaacccttcctcaattagaacatttatggcagcaaaagtacccacatgttccaataccgtcctacatgctagccaaa aaccaagaggatgtgcttagtcaaattttaactctgaaagaacgggaacttttggagcgtgaaagaatagagcgcgaaag gatagagcgggagcgattagatcgccttgaaagggaaaaacaactggaacgcgaacgtcaggagcgcatcgagagcttaa aaggataccttcggatatttatccatgaattcaagacacaagccatgtggactactccatccataacaaaaggtactggg aaaggtatgaggaccaaggtggaaactgaaggttccaaagctcccaaaacaacagaagattttgttaaacaggagataga gaggcagtacacagagagacattacactgaggagatgttcagaagacagcaggaatacctcagaagccaagaggagaggt acctcaaacagaggatgatggaacagaaagaggatgccaaacacaaagtatccaaaaatatagacgataagtcgcagatc ttctcacagagcgggtacaaaggatttccacctagtactacagcaggcatgccagtaaaggcagaacctagctttagcat atacggttataatccacatcagctttcgtacatcacacctgatcagcttcatttacatgggttagacaagaaggatgaca aaagtttgatggaagccaaacagagtcttgctagtgttgctaacagaggacattcctcatcaccaaaacgttctagttca tccattcctccacctctgatcaaagacagcaagcctcatagttcagtgatcgttgaaaaccgtggtaaagatgggtcaaa gtcagctagcccacgacctgcccattctcaccatggtagtaacttgtctctgtcatcatcccctcgtagtcatcccaaac cagcacacactccaactcgtcaactagatcatcaggaacaatctatggatctctcccagtcctcatcaggccttcgtgta tctccccagtcagctttcaggtctacagatgggaaacacttaggttccaggacacaaagtcctctcagtgttgcaagtcc tcatcaacttaatgccgccatcatgcagcagcctgtaaattatcaccgtgacggcaagtcaaagaacacaccacccggta aaagtacgggacacctcatgtctgcagcaatagctcaacctcctgtgtcactgccacaaggggcttatagctgtagcctc atacaacaggggcttgtacctaaccctatctactctcaaaatacggtcaaatctgcagcagagcagcagaactcgcccaa ccagttgagtaatggttcactcacaactcacagtgttgctgctacctcatcgcattccacacattcattcactggacaag gtgtgaaacgcaaaaataataaagagggtagtggaagaaaaagacagaagagtgaaagttctagtgtaaataattcaaac tctggcatttctattcctgttactacaccccagatactgactaatcattctccatataccactagtaacagtgtcaattc aggagttatgtctgatgttatgtccaaatctacaccaagtgtttcagcttcatcatcatcagcttctatgttgtcatccc ccgctgcatatctttctgcttcttctagtgctgctttacaaggaccttcagggttcatggatagttttaaatcgtttgta gaaaacgctgtacaaaatgcattctttcaagatcaagatctaaatcgtaaaaaacctcagactcagtctcagcccggacc agtaccaacatcactgccgcaacaacagacctctcagcagcaatctggtcagcaacaaaggccacagagcaaccctgtac aaagcaacaacagctcagcgtccacaaatgaagaaagtacttcacaaaccctgggtaacagtactagtagtttgaacagc agcaatagtgcattgatggaagtcaatagaaacgatacagacagtgatactcttagtgctcctagtcctccacctcactt taaggacttaaattctgcatcacccaataaatctgcaaatcatccaaagttaaagaaagcctggcttcagcgacactctg atgaggataaagagataaagaactcctcgtctcctcccaggaatgagggggagggtcagccccaggaggatatcgtcaaa aattgttatgtgaatttatatgacatttcccccagtaaggaaggagggaccaagtcacctattagtgctcgtgtactccc aaatggaaatatcctgaaggaggatgaacatggagaatccacaacgtctgcatctgaaacagaatctcagatagcggaca tttccactgggaaaaaacgttctaaaacgaaacgtaacaataacggcggtgccaaaaaagccaagggtgaagtagagaat acggaggaaggcagttcacaaagtaaaaagaaaaaccaagaagagcaaagaatcaaaagagagctcgaccaaatcctcga caacaaagatgcttcctccttcaacaaacctttagtgaaagctaccactacaacgctcaagaaaacttgtgaaccattcc tccaggacggctcctgtagtgaagtgacaccaaaactgatgaagtgtcgggaatgcaaaatgacacctactcagcgcagc aagaaacttcccaatatcttctgtcgtttctgggcttttagaaggttgcgatacagtcagaaaggcttccttactattgc tggtttctctgaactgaccgatgctgagaatgatgacatcgagccatggttaccccacgtacctctgatagaaccaaaga tagacatagaaacttccaaatatatcgtcgccaaggtgggagacaagttctgtgagctggtccagcaagagcaggaagcc aaaaacctggctggtgatgatgatcantacagtcagaaaggcttccttactattgctggtttctctgaactgaccgatgc tgagaatgatgacatcgagccatggttaccccacgtacctctgatagaaccaaagatagacatagaaacttccaaatata tcgtcgccaaggtgggagacaagttctgtgagctggtccagcaagagcaggaagccaaaaacctggctggtgatgatgct aagatagcatggaaaagggcggtgacaggagtgcgagagatgtgtgatgtttgtgacacaacactgttcaacatgcactg ggtgtgtcataagtgtggctttgttgtgtgtctggactgctataaagtccgtatcaaggccgtacgccaggagaatggtg aggaggaggaagaccctctaactcgggaactctctgacgagcaacgacaatggctgacctgcagtgctaaccgctcccaa cacgagccagataaactcatgctcactcagatcattccaagagatgcattgtgggaagtaggtaagctgattcatgacat gaagaagaagtggagtataaagaccaagtgtacatgtggacaggccaattccaagttgatgcagaaaaacggcattaatc agcaatatgtgcagcaggcactgaatcatcttgctaataataaaaccagtaagaagatggtgaatggtataggggaggac cataaaatgtacaaaggaaaaaagcaagaagctattaatggaaatgtaaaatataatccagacagtagttcacctcttag tttattggctgatgtcgcatccatggactccgaaaatagtagggatcgcagcgagtctccgtttgggaaaggaatagaca agtatggtaaatcatacaacccaattacggagcctgtgtcacctattgggggtggaaataatactggtgaaggagaaaac gataaaaagaaccctgctagttgctcaaccttgcgtgaacttctcacaaaaaccgccaatgttaaaaacgagaaaagcaa gaaaagctccaaatctaaatccggaagtagttctttggatgacattatacagtctgttgtggaaaaacaattaccaaaag acggtgatagtcaacctatgaaactaatgcattacgttccaagatttggttacagcggaatgattgctcgtgatgcccct attctagtccataatcttacagaaaccagtgtactttatcctgatgtcccacattcatggttgtgtgatggtcgtttgtt gaggcttcatgatcctaaacacagaggcaatttcaaaatatttcaggagcagtggaaacgaggtcaaccagttttagtgt caggagtacacaaagctctgaacaaaaatctgtggtcaccgcagtccttcagcaagcagtttggtcgtgaaaagaatgat cttgtgaattgtagtaatggaaatattattgttggacatccaatgtcttgtttctgggatggatttgagaaacttctaga acgtctggtagatgaggagaacaatcagcctttgttactgaagctcaaggattggccaccgggcgatgattttagtgaga ttatgccaaaccattttgatgatctcatgcaagctttgccacttccagaatacacacatcgtcacggcaaactgaatctg gcctcacggctacctgactttctcgtcagacctgatcttggaccaaagatgtacaatgcctatggttcagcattcagtcc tcaggagggaaccacaaatctccatcttgatgtttctgatgctgttaactgtatggtgtacgtgggtatccctgacgacg gaccaggtggtaaacaacaccacgtcaatgccgctctgaaagccatcgatgacgcaggctgtgacatcatcacaaaacgt agaatcagggaaatcaatgaagtacctggagcgctttggcacatctttgatgcggcagatgctgataaaattagggattt cttgaacatggttgggaaggagagaggggaggaggtagagctgcaccatgaccccatacatgatcagagttggtaccttg acaatgagctccgtgacagactgtataaggagtatggagtactcggctacaccatcgtacagtgtatgggggatgcagtc ttcatccctgcaggtgcccctcaccaagtcaagaacttgcatagctgtataaaggtggcagaagattttgtctcaccaga gcacctcaaccattgcttcagtctcacccaggaattcagacttttgtctgacacccactctaatcatgaagacaagctgc aggtgaagaacataatttaccacgctgtcaaggattctttagctgttctcaacaatgcagatcccgatgatgactaa |
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Protein
| Protein ID | pfu_aug2.0_254.1_13885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_254.1_13885.t1 MKKSPEKIKTQHAKNLEVSTKCPISNELKKILTTISTALTIEHKIKHRRTPSKLENFRSIVDKVGLSGIKKRAIEFLEDS QLAFVEDRSLKCHEEGEEVSHPTVVDRPAVGLAIKAWLDYQDGQKLLLTTPTILVGYRLEVYRAEGTTQWYTAVIQGYNH TTKTLVVTDDTVLEEHNEDPALIQMRLLDDGVVDFILRGVEIGIGARRTRQTNKDKDQVNAVRNSTQQQNSTSKPLPRNA GTKAKQKEVPVSVPALPQESEKEKQQQKSKPARDRKRKPNESQGESVSSANTKRTKAVDNKKAQVLDEKADSPKVRQTDK SESEKSEKRTTPVKDLDTRLTRDKLKTITQTHGNKKDTGNKDNHRIDKSVKPSSRKGSPLLRNKTRESDKSNDVCYNQTE SDTDKGVVSENENLANSVTEEKCSGNDELDSKVKGQESDNDSKKELCDTVISKDVTEKTSCDKIKSSQKSSSECSETETK VSSDNSEVTDTTDDNMHYMKQRLLNSSTSSDKNPAPSLAANIDVNRSVTEQIAKLTRSENSSSSQAEEDKSTASTSKSVS PKTSSHYENQLDHKDYRNHNSYDVNALGSLSSTVNSHAEDHFRSSSRASDHSNSGCSADERRPGSRVEDIRVSSKNSPAT SPLVIDKAEPVHPYRDPELMKKNTVHSNVHGMLGAQKYPNVPTPIPSASPVTLPSTTSYPSHPIASRSHVLPSMHYPPTL PSALSGAAALSQLGLSPGLSQLDPTSLAALQQQQQLAAMQYNLLLARSYPSPANLTLPQLEHLWQQKYPHVPIPSYMLAK NQEDVLSQILTLKERELLERERIERERIERERLDRLEREKQLERERQERIESLKGYLRIFIHEFKTQAMWTTPSITKGTG KGMRTKVETEGSKAPKTTEDFVKQEIERQYTERHYTEEMFRRQQEYLRSQEERYLKQRMMEQKEDAKHKVSKNIDDKSQI FSQSGYKGFPPSTTAGMPVKAEPSFSIYGYNPHQLSYITPDQLHLHGLDKKDDKSLMEAKQSLASVANRGHSSSPKRSSS SIPPPLIKDSKPHSSVIVENRGKDGSKSASPRPAHSHHGSNLSLSSSPRSHPKPAHTPTRQLDHQEQSMDLSQSSSGLRV SPQSAFRSTDGKHLGSRTQSPLSVASPHQLNAAIMQQPVNYHRDGKSKNTPPGKSTGHLMSAAIAQPPVSLPQGAYSCSL IQQGLVPNPIYSQNTVKSAAEQQNSPNQLSNGSLTTHSVAATSSHSTHSFTGQGVKRKNNKEGSGRKRQKSESSSVNNSN SGISIPVTTPQILTNHSPYTTSNSVNSGVMSDVMSKSTPSVSASSSSASMLSSPAAYLSASSSAALQGPSGFMDSFKSFV ENAVQNAFFQDQDLNRKKPQTQSQPGPVPTSLPQQQTSQQQSGQQQRPQSNPVQSNNSSASTNEESTSQTLGNSTSSLNS SNSALMEVNRNDTDSDTLSAPSPPPHFKDLNSASPNKSANHPKLKKAWLQRHSDEDKEIKNSSSPPRNEGEGQPQEDIVK NCYVNLYDISPSKEGGTKSPISARVLPNGNILKEDEHGESTTSASETESQIADISTGKKRSKTKRNNNGGAKKAKGEVEN TEEGSSQSKKKNQEEQRIKRELDQILDNKDASSFNKPLVKATTTTLKKTCEPFLQDGSCSEVTPKLMKCRECKMTPTQRS KKLPNIFCRFWAFRRLRYSQKGFLTIAGFSELTDAENDDIEPWLPHVPLIEPKIDIETSKYIVAKVGDKFCELVQQEQEA KNLAGDDDXYSQKGFLTIAGFSELTDAENDDIEPWLPHVPLIEPKIDIETSKYIVAKVGDKFCELVQQEQEAKNLAGDDA KIAWKRAVTGVREMCDVCDTTLFNMHWVCHKCGFVVCLDCYKVRIKAVRQENGEEEEDPLTRELSDEQRQWLTCSANRSQ HEPDKLMLTQIIPRDALWEVGKLIHDMKKKWSIKTKCTCGQANSKLMQKNGINQQYVQQALNHLANNKTSKKMVNGIGED HKMYKGKKQEAINGNVKYNPDSSSPLSLLADVASMDSENSRDRSESPFGKGIDKYGKSYNPITEPVSPIGGGNNTGEGEN DKKNPASCSTLRELLTKTANVKNEKSKKSSKSKSGSSSLDDIIQSVVEKQLPKDGDSQPMKLMHYVPRFGYSGMIARDAP ILVHNLTETSVLYPDVPHSWLCDGRLLRLHDPKHRGNFKIFQEQWKRGQPVLVSGVHKALNKNLWSPQSFSKQFGREKND LVNCSNGNIIVGHPMSCFWDGFEKLLERLVDEENNQPLLLKLKDWPPGDDFSEIMPNHFDDLMQALPLPEYTHRHGKLNL ASRLPDFLVRPDLGPKMYNAYGSAFSPQEGTTNLHLDVSDAVNCMVYVGIPDDGPGGKQHHVNAALKAIDDAGCDIITKR RIREINEVPGALWHIFDAADADKIRDFLNMVGKERGEEVELHHDPIHDQSWYLDNELRDRLYKEYGVLGYTIVQCMGDAV FIPAGAPHQVKNLHSCIKVAEDFVSPEHLNHCFSLTQEFRLLSDTHSNHEDKLQVKNIIYHAVKDSLAVLNNADPDDD |
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