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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_254.1_13890
Locus scaffold254.1 : 381361 ... 386200 : +
To GenomeBrowser scaffold254.1:381361..386200
Genes list of scaffold scaffold254.1
Synonym pfu_aug1.0_9698.1_02785

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_254.1_13890.t1 1 1 MFS_1 5 105 2.5e-10 39.6 5.3e-14 2.6e-10 39.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_254.1_13890.t1 gi|676421844|ref|XP_009043872.1| hypothetical protein LOTGIDRAFT_152166 [Lottia gigantea] 5.0e-27

Transcript
Transcript IDpfu_aug2.0_254.1_13890.t1
Definition-
>pfu_aug2.0_254.1_13890.t1
atgacaacattatcgttagtattcacattagtgggaaaaatggctagcgctggcgccttcagtactgtgttcctctacac
accagaaatgtacccaactaatctcagaaatgtgggcataggattagcttcttcctttggtagagtcggggccatgattg
cgccattcgcaggagtactggccacgtatgtatcttgggccccaggagctatagtgagtggcatgtgcattctggttagt
tttctatgtctgttcctacctgagacagtgggttacgaactacccagtacaatggaggaactaaaagagtggtacaagga
ccataaaagtgcaccgaaatggaacagaaaaactaatacacaaaatggaaataagaaacatacagaagacagtactgctg
tcaatacaaatgaaaatcaataa

Protein
Protein IDpfu_aug2.0_254.1_13890.t1
Definition-
>pfu_aug2.0_254.1_13890.t1
MTTLSLVFTLVGKMASAGAFSTVFLYTPEMYPTNLRNVGIGLASSFGRVGAMIAPFAGVLATYVSWAPGAIVSGMCILVS
FLCLFLPETVGYELPSTMEELKEWYKDHKSAPKWNRKTNTQNGNKKHTEDSTAVNTNENQ

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